Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CACNA1AO00555 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNA1AO00555 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
CACNA1AO00555 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CACNA1AO00555 AC011298.2-201ENST00000617989 482 ntBASIC18.81■□□□□ 0.6
CACNA1AO00555 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1AO00555 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNA1AO00555 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.81■□□□□ 0.6
CACNA1AO00555 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNA1AO00555 AC010542.4-201ENST00000563151 1910 ntBASIC18.81■□□□□ 0.6
CACNA1AO00555 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CACNA1AO00555 AC012615.1-201ENST00000565797 1299 ntBASIC18.8■□□□□ 0.6
CACNA1AO00555 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 AL121672.3-201ENST00000608644 468 ntBASIC18.8■□□□□ 0.6
CACNA1AO00555 AL691403.2-201ENST00000618460 490 ntBASIC18.8■□□□□ 0.6
CACNA1AO00555 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1AO00555 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA1AO00555 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNA1AO00555 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA1AO00555 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNA1AO00555 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1AO00555 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNA1AO00555 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNA1AO00555 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CACNA1AO00555 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNA1AO00555 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 TSSC2-201ENST00000450217 709 ntBASIC18.79■□□□□ 0.6
CACNA1AO00555 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 AC011498.5-201ENST00000592027 486 ntBASIC18.79■□□□□ 0.6
CACNA1AO00555 AC026471.6-201ENST00000622954 1905 ntBASIC18.79■□□□□ 0.6
CACNA1AO00555 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CACNA1AO00555 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CACNA1AO00555 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CACNA1AO00555 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CACNA1AO00555 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 TPSP2-201ENST00000561760 610 ntBASIC18.79■□□□□ 0.6
CACNA1AO00555 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA1AO00555 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA1AO00555 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNA1AO00555 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNA1AO00555 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA1AO00555 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNA1AO00555 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA1AO00555 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CACNA1AO00555 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 CHCHD2P8-201ENST00000429873 447 ntBASIC18.78■□□□□ 0.6
CACNA1AO00555 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNA1AO00555 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CACNA1AO00555 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA1AO00555 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CACNA1AO00555 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNA1AO00555 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CACNA1AO00555 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CACNA1AO00555 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 AC131212.4-201ENST00000623606 975 ntBASIC18.78■□□□□ 0.6
CACNA1AO00555 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CACNA1AO00555 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA1AO00555 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA1AO00555 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA1AO00555 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA1AO00555 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CACNA1AO00555 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CACNA1AO00555 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms