Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 RNF152P1-201ENST00000397754 604 ntBASIC19.42■□□□□ 0.7
C4orf47A7E2U8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 B3GAT3P1-201ENST00000471720 806 ntBASIC19.42■□□□□ 0.7
C4orf47A7E2U8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 DGCR10-201ENST00000609839 495 ntBASIC19.42■□□□□ 0.7
C4orf47A7E2U8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.42■□□□□ 0.7
C4orf47A7E2U8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.42■□□□□ 0.7
C4orf47A7E2U8 KRT8P36-201ENST00000489121 1440 ntBASIC19.42■□□□□ 0.7
C4orf47A7E2U8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 HLA-G-202ENST00000376815 851 ntBASIC19.41■□□□□ 0.7
C4orf47A7E2U8 HLA-G-203ENST00000376818 1127 ntBASIC19.41■□□□□ 0.7
C4orf47A7E2U8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 AC011506.1-201ENST00000474329 610 ntBASIC19.41■□□□□ 0.7
C4orf47A7E2U8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 AC026271.3-201ENST00000571884 352 ntBASIC19.41■□□□□ 0.7
C4orf47A7E2U8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.41■□□□□ 0.7
C4orf47A7E2U8 AC011484.1-201ENST00000377652 1995 ntBASIC19.41■□□□□ 0.7
C4orf47A7E2U8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 AL445675.2-201ENST00000620291 557 ntBASIC19.4■□□□□ 0.7
C4orf47A7E2U8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.4■□□□□ 0.7
C4orf47A7E2U8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C4orf47A7E2U8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
C4orf47A7E2U8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.39■□□□□ 0.7
C4orf47A7E2U8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 AC092647.4-201ENST00000457211 535 ntBASIC19.39■□□□□ 0.69
C4orf47A7E2U8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.39■□□□□ 0.69
C4orf47A7E2U8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 HMGA1P5-201ENST00000412453 271 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms