Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 SMG8-203ENST00000578922 2178 ntBASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 AL353708.3-201ENST00000610272 989 ntBASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 CR392000.1-201ENST00000624770 1228 ntBASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TBC1D3FA6NER0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TBC1D3FA6NER0 AC116351.2-201ENST00000606540 1585 ntBASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.74■□□□□ 0.75
TBC1D3FA6NER0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 AC018553.1-201ENST00000616682 1458 ntBASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 KSR1P1-201ENST00000446298 240 ntBASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 NUDT16P1-203ENST00000513809 620 ntBASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 TFP1-202ENST00000475455 1573 ntBASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D3FA6NER0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 MMP23A-201ENST00000234610 1017 ntBASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 NIFKP9-201ENST00000419265 221 ntBASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TBC1D3FA6NER0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms