Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-4A0A0B4J246 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 GABARAPL3-202ENST00000624044 1851 ntBASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 MIR6821-201ENST00000617625 74 ntBASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-4A0A0B4J246 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-4A0A0B4J246 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-4A0A0B4J246 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
TRAV8-4A0A0B4J246 AC027702.1-201ENST00000563810 1770 ntBASIC13.83□□□□□ -0.19
TRAV8-4A0A0B4J246 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-4A0A0B4J246 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-4A0A0B4J246 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 RBM17P2-201ENST00000616397 1405 ntBASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 FP700111.2-201ENST00000619190 1892 ntBASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 AC007322.3-201ENST00000426526 701 ntBASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 NTF6G-201ENST00000591094 616 ntBASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 AC019069.1-201ENST00000610008 1333 ntBASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-4A0A0B4J246 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-4A0A0B4J246 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms