Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-3A0A0A0MS03 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 AL355472.2-201ENST00000422958 438 ntBASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-3A0A0A0MS03 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC087623.3-201ENST00000607047 1098 ntBASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC011767.1-201ENST00000617410 1153 ntBASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-3A0A0A0MS03 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC006015.1-201ENST00000429970 570 ntBASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 KRT18P5-201ENST00000436075 1291 ntBASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 C2orf69P4-201ENST00000565394 541 ntBASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV5-3A0A0A0MS03 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-3A0A0A0MS03 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-3A0A0A0MS03 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms