Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR7E25P-202ENST00000641088 5937 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.34□□□□□ -1.23
COL4A5P29400 MROH3P-201ENST00000435735 2676 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 PABPC1P6-201ENST00000445594 1829 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.34□□□□□ -1.23
COL4A5P29400 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 RNA5SP234-201ENST00000363916 119 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
COL4A5P29400 AC012075.1-201ENST00000436549 580 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A5P29400 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A5P29400 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A5P29400 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 HMGN2P36-201ENST00000529541 409 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.34□□□□□ -1.23
COL4A5P29400 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A5P29400 MIR4505-201ENST00000582238 73 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 AC007204.2-201ENST00000615022 616 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
COL4A5P29400 AC011815.2-201ENST00000618230 2021 ntBASIC7.34□□□□□ -1.23
COL4A5P29400 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.34□□□□□ -1.23
COL4A5P29400 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
COL4A5P29400 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.34□□□□□ -1.24
COL4A5P29400 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
COL4A5P29400 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
COL4A5P29400 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL4A5P29400 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL4A5P29400 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
COL4A5P29400 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 AC020978.8-201ENST00000571975 3022 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 SNORA74A-201ENST00000364089 198 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 RN7SKP124-201ENST00000364730 341 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A5P29400 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.33□□□□□ -1.24
COL4A5P29400 RPS15AP30-201ENST00000420976 390 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A5P29400 CFL1P1-202ENST00000432948 411 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A5P29400 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.33□□□□□ -1.24
COL4A5P29400 OR4A46P-201ENST00000527255 933 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 AP000662.1-201ENST00000530952 487 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 AC141002.1-201ENST00000607025 279 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.33□□□□□ -1.24
COL4A5P29400 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
COL4A5P29400 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
COL4A5P29400 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A5P29400 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A5P29400 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
COL4A5P29400 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
COL4A5P29400 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A5P29400 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 RNU1-19P-201ENST00000363306 165 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 RN7SKP59-201ENST00000410520 314 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A5P29400 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 FMO7P-201ENST00000436045 768 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 GAPDHP58-201ENST00000438477 1006 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.32□□□□□ -1.24
COL4A5P29400 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A5P29400 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A5P29400 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.32□□□□□ -1.24
COL4A5P29400 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL4A5P29400 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 AC073429.2-201ENST00000569694 1444 ntBASIC7.32□□□□□ -1.24
COL4A5P29400 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A5P29400 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms