Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTNP04004 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
VTNP04004 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.92□□□□□ -1.3
VTNP04004 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.92□□□□□ -1.3
VTNP04004 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.92□□□□□ -1.3
VTNP04004 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.92□□□□□ -1.3
VTNP04004 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.92□□□□□ -1.3
VTNP04004 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
VTNP04004 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTNP04004 AL157831.2-201ENST00000564681 3095 ntBASIC6.92□□□□□ -1.3
VTNP04004 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTNP04004 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 AC006213.6-201ENST00000623722 4179 ntBASIC6.91□□□□□ -1.3
VTNP04004 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 LCN1P2-201ENST00000372030 223 ntBASIC6.91□□□□□ -1.3
VTNP04004 RNA5SP122-201ENST00000384457 108 ntBASIC6.91□□□□□ -1.3
VTNP04004 AL353662.1-201ENST00000439099 327 ntBASIC6.91□□□□□ -1.3
VTNP04004 AC094085.1-201ENST00000468914 584 ntBASIC6.91□□□□□ -1.3
VTNP04004 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.91□□□□□ -1.3
VTNP04004 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 AC092332.1-201ENST00000563684 829 ntBASIC6.91□□□□□ -1.3
VTNP04004 MIR5095-201ENST00000578844 88 ntBASIC6.91□□□□□ -1.3
VTNP04004 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.91□□□□□ -1.3
VTNP04004 AC067773.1-201ENST00000603284 1094 ntBASIC6.91□□□□□ -1.3
VTNP04004 AP001823.1-201ENST00000604056 1003 ntBASIC6.91□□□□□ -1.3
VTNP04004 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.91□□□□□ -1.3
VTNP04004 AL591167.1-201ENST00000607321 456 ntBASIC6.91□□□□□ -1.3
VTNP04004 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.91□□□□□ -1.3
VTNP04004 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.91□□□□□ -1.3
VTNP04004 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 AC013488.1-201ENST00000526618 1838 ntBASIC6.91□□□□□ -1.3
VTNP04004 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VTNP04004 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.91□□□□□ -1.3
VTNP04004 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.91□□□□□ -1.3
VTNP04004 NCOA4P3-201ENST00000513203 1877 ntBASIC6.91□□□□□ -1.3
VTNP04004 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 FO082842.1-201ENST00000423552 1370 ntBASIC6.91□□□□□ -1.3
VTNP04004 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.91□□□□□ -1.3
VTNP04004 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTNP04004 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
VTNP04004 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.91□□□□□ -1.3
VTNP04004 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VTNP04004 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.9□□□□□ -1.3
VTNP04004 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
VTNP04004 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 LCOR-201ENST00000286067 4542 ntBASIC6.9□□□□□ -1.3
VTNP04004 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 RNU1-49P-201ENST00000363468 159 ntBASIC6.9□□□□□ -1.3
VTNP04004 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VTNP04004 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.9□□□□□ -1.3
VTNP04004 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.9□□□□□ -1.3
VTNP04004 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 UBE2V2P4-201ENST00000447495 259 ntBASIC6.9□□□□□ -1.3
VTNP04004 AC016724.1-201ENST00000453215 421 ntBASIC6.9□□□□□ -1.3
VTNP04004 PPIAP27-201ENST00000453800 265 ntBASIC6.9□□□□□ -1.3
VTNP04004 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 AC098847.1-201ENST00000473094 348 ntBASIC6.9□□□□□ -1.3
VTNP04004 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 AC090568.1-201ENST00000509499 856 ntBASIC6.9□□□□□ -1.3
VTNP04004 RN7SKP238-201ENST00000516483 249 ntBASIC6.9□□□□□ -1.3
VTNP04004 Y_RNA.710-201ENST00000516975 110 ntBASIC6.9□□□□□ -1.3
VTNP04004 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 AP001858.2-201ENST00000536213 601 ntBASIC6.9□□□□□ -1.3
VTNP04004 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.9□□□□□ -1.3
VTNP04004 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.9□□□□□ -1.3
VTNP04004 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 AC009120.3-201ENST00000563335 499 ntBASIC6.9□□□□□ -1.3
VTNP04004 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.9□□□□□ -1.3
VTNP04004 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.9□□□□□ -1.3
VTNP04004 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VTNP04004 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTNP04004 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms