Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 NCOA4P3-201ENST00000513203 1877 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 MIR143-201ENST00000385300 106 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 AL132875.1-201ENST00000403623 949 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 ZNF322P1-201ENST00000568013 1209 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC069234.4-201ENST00000621276 412 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 CTAGE11P-201ENST00000451540 2353 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 AC009120.2-204ENST00000621548 2032 ntBASIC7.62□□□□□ -1.19
SNED1Q8TER0 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SNED1Q8TER0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SNED1Q8TER0 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AL035660.1-201ENST00000422041 222 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 ACA64.1-201ENST00000459171 127 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC020978.8-201ENST00000571975 3022 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 MAPK10-287ENST00000641217 3037 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC123769.1-201ENST00000530992 3192 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC127070.3-201ENST00000503695 3263 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AL139156.3-201ENST00000454802 394 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 RN7SL799P-201ENST00000475891 298 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AP000662.1-201ENST00000530952 487 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC079600.1-201ENST00000550326 297 ntBASIC7.61□□□□□ -1.19
SNED1Q8TER0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.61□□□□□ -1.19
SNED1Q8TER0 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms