Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
FREM3P0C091 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
FREM3P0C091 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 CASC19-243ENST00000641588 1546 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
FREM3P0C091 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
FREM3P0C091 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.75□□□□□ -1.49
FREM3P0C091 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 RN7SL168P-201ENST00000463821 279 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.75□□□□□ -1.49
FREM3P0C091 SNX18P25-201ENST00000510539 758 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.75□□□□□ -1.49
FREM3P0C091 AP005639.1-201ENST00000526939 192 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.75□□□□□ -1.49
FREM3P0C091 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.75□□□□□ -1.49
FREM3P0C091 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.75□□□□□ -1.49
FREM3P0C091 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.75□□□□□ -1.49
FREM3P0C091 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.75□□□□□ -1.49
FREM3P0C091 AC009120.3-201ENST00000563335 499 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.75□□□□□ -1.49
FREM3P0C091 AC004232.2-201ENST00000574245 821 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AP005136.2-201ENST00000583253 1049 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.75□□□□□ -1.49
FREM3P0C091 AC011497.2-201ENST00000600255 639 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AC091167.5-201ENST00000605689 894 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AC012254.5-201ENST00000623573 478 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AL132640.3-201ENST00000630473 177 ntBASIC5.75□□□□□ -1.49
FREM3P0C091 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.75□□□□□ -1.49
FREM3P0C091 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
FREM3P0C091 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
FREM3P0C091 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FREM3P0C091 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC5.75□□□□□ -1.49
FREM3P0C091 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 AC079777.1-201ENST00000623836 1953 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 RNU1-65P-201ENST00000363919 148 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.74□□□□□ -1.49
FREM3P0C091 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.74□□□□□ -1.49
FREM3P0C091 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 RN7SL165P-201ENST00000477476 291 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC106800.3-201ENST00000511389 308 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 RN7SKP35-201ENST00000517210 151 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.74□□□□□ -1.49
FREM3P0C091 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC011504.1-201ENST00000623331 4103 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 BRAFP1-201ENST00000445336 2703 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC5.74□□□□□ -1.49
FREM3P0C091 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 AKAP17BP-201ENST00000431706 2719 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.74□□□□□ -1.49
FREM3P0C091 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
FREM3P0C091 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 TMCC1P1-201ENST00000518897 1980 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
FREM3P0C091 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.74□□□□□ -1.49
FREM3P0C091 MTND2P12-201ENST00000417560 1252 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 RPL36P18-201ENST00000419316 318 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AC066692.1-201ENST00000421721 457 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AC099782.1-201ENST00000425889 474 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 EIF5AP4-201ENST00000441206 465 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AL590004.3-202ENST00000445883 451 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AC002553.3-201ENST00000453002 341 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 RN7SL714P-201ENST00000487050 298 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.74□□□□□ -1.49
FREM3P0C091 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 RNA5SP418-201ENST00000515951 117 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 AC073389.3-201ENST00000609434 935 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AL365181.4-201ENST00000609800 547 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 AC092266.1-201ENST00000610958 165 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 TCL6_3.1-201ENST00000619064 137 ntBASIC5.74□□□□□ -1.49
FREM3P0C091 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FREM3P0C091 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
FREM3P0C091 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms