Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPL7P18-201ENST00000478965 734 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AL445187.1-201ENST00000502685 260 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 RAB30-209ENST00000532548 644 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OR7E19P-202ENST00000589942 844 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AL353726.1-201ENST00000614041 1000 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC010538.1-201ENST00000615131 663 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC002550.2-201ENST00000621246 394 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 CGA-206ENST00000630630 832 ntTSL 2 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 KYNUP1-201ENST00000466683 1406 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC10.65□□□□□ -0.71
PHF8Q9UPP1 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
PHF8Q9UPP1 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PHF8Q9UPP1 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PHF8Q9UPP1 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PHF8Q9UPP1 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PHF8Q9UPP1 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AP000542.3-201ENST00000623391 6114 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC098614.1-202ENST00000634895 1830 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 RNA5SP260-201ENST00000363849 111 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 RNU6-1227P-201ENST00000383981 107 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 RNU5A-6P-201ENST00000384136 116 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 RNU6-348P-201ENST00000384386 107 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 Y_RNA.582-201ENST00000391023 95 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC023141.10-201ENST00000415634 200 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC013403.1-201ENST00000436954 263 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 RPL7P36-201ENST00000444633 681 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 SCDP1-201ENST00000455244 1081 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 BX322784.1-201ENST00000455793 1077 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC146507.1-201ENST00000468335 354 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC069439.1-201ENST00000494739 167 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC025459.1-201ENST00000504072 156 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 MTCO1P35-201ENST00000515270 228 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC068631.3-201ENST00000538831 225 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC005261.5-201ENST00000596280 355 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 AC096720.2-201ENST00000623308 2458 ntBASIC10.64□□□□□ -0.71
PHF8Q9UPP1 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC10.64□□□□□ -0.71
PHF8Q9UPP1 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 RP1-206ENST00000636932 3649 ntTSL 5 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 ATP5A1P10-201ENST00000622403 1603 ntBASIC10.63□□□□□ -0.71
PHF8Q9UPP1 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PHF8Q9UPP1 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms