Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
HLA-CQ95604 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
HLA-CQ95604 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC117529.2-201ENST00000512159 2068 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 MAPK10-313ENST00000641405 2469 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 METTL21EP-201ENST00000298105 713 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 SNORA11.3-201ENST00000408471 128 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 ATP5HP4-201ENST00000414313 475 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 FBP2P1-202ENST00000424473 530 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AL365184.2-201ENST00000431139 435 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 UBE2FP3-201ENST00000436366 524 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AC239367.2-201ENST00000447309 705 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 RPS4XP19-201ENST00000460237 736 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 RN7SL414P-201ENST00000469545 294 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 RN7SL58P-201ENST00000473445 294 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 H3F3AP5-201ENST00000475267 429 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 GAPDHP39-201ENST00000481866 979 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 OR9A1P-202ENST00000484361 945 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AC117395.1-201ENST00000487390 403 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC010368.1-201ENST00000510160 456 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 Vault.2-201ENST00000516519 98 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC8.52□□□□□ -1.05
HLA-CQ95604 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 RAB30-209ENST00000532548 644 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 AL157687.1-201ENST00000554853 619 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AL591767.2-201ENST00000554984 173 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 YWHAQP7-201ENST00000603536 658 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 LLPHP1-201ENST00000603571 367 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AL590282.1-201ENST00000610379 1136 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AL442067.2-201ENST00000614033 363 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AP003789.1-201ENST00000617737 605 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 SNORA11.6-201ENST00000619030 128 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-CQ95604 AP000787.3-201ENST00000634407 307 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-CQ95604 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HLA-CQ95604 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
HLA-CQ95604 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.52□□□□□ -1.05
HLA-CQ95604 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-CQ95604 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC079178.2-201ENST00000439323 1624 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 AC074198.1-201ENST00000506546 1397 ntBASIC8.51□□□□□ -1.05
HLA-CQ95604 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HLA-CQ95604 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-CQ95604 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-CQ95604 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms