Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 AC061975.7-201ENST00000592016 2692 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
BRCA2P51587 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 SNRPEP6-201ENST00000407465 277 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.6□□□□□ -1.35
BRCA2P51587 AC126177.5-201ENST00000549599 178 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.6□□□□□ -1.35
BRCA2P51587 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 AL023583.1-201ENST00000607518 1143 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 OR11H2-202ENST00000641517 1085 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 AC087269.2-201ENST00000641764 975 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC6.6□□□□□ -1.35
BRCA2P51587 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BRCA2P51587 AC114786.1-201ENST00000512892 1415 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.6□□□□□ -1.35
BRCA2P51587 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 NMD3P2-201ENST00000421815 761 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 AC245047.1-201ENST00000433276 873 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BRCA2P51587 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 BIN2P1-201ENST00000504996 1530 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.59□□□□□ -1.35
BRCA2P51587 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.59□□□□□ -1.35
BRCA2P51587 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
BRCA2P51587 MIR192-201ENST00000384915 110 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 AC011753.3-201ENST00000443436 406 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 RPS23P9-201ENST00000448848 438 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.59□□□□□ -1.35
BRCA2P51587 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCA2P51587 AC010245.2-201ENST00000606908 1167 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 AC016251.1-201ENST00000624299 4198 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BRCA2P51587 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCA2P51587 AL139805.2-201ENST00000455305 2433 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
BRCA2P51587 GAPDHP24-201ENST00000328713 983 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BRCA2P51587 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BRCA2P51587 AL390774.1-201ENST00000411924 246 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 AL590240.2-201ENST00000413370 894 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCA2P51587 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.59□□□□□ -1.35
BRCA2P51587 AC006466.1-201ENST00000438721 289 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 OR7E157P-201ENST00000494376 911 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.59□□□□□ -1.35
BRCA2P51587 HMGB1P42-201ENST00000532126 553 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.59□□□□□ -1.35
BRCA2P51587 AC209154.1-201ENST00000582156 337 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCA2P51587 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
BRCA2P51587 AC131971.1-201ENST00000332881 1482 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 AC002090.1-201ENST00000625000 2138 ntBASIC6.59□□□□□ -1.35
BRCA2P51587 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
BRCA2P51587 RNU1-46P-201ENST00000384425 164 ntBASIC6.59□□□□□ -1.36
BRCA2P51587 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
BRCA2P51587 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.59□□□□□ -1.36
BRCA2P51587 OR4A42P-201ENST00000531397 938 ntBASIC6.59□□□□□ -1.36
BRCA2P51587 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.59□□□□□ -1.36
BRCA2P51587 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.59□□□□□ -1.36
BRCA2P51587 AC087385.3-201ENST00000620477 187 ntBASIC6.59□□□□□ -1.36
BRCA2P51587 AC012653.2-201ENST00000621880 420 ntBASIC6.59□□□□□ -1.36
BRCA2P51587 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.59□□□□□ -1.36
BRCA2P51587 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms