Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 MRPS6P2-201ENST00000381143 370 ntBASIC5.87□□□□□ -1.47
SHC1P29353 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.87□□□□□ -1.47
SHC1P29353 RN7SKP221-201ENST00000410420 301 ntBASIC5.87□□□□□ -1.47
SHC1P29353 RNA5SP251-201ENST00000410614 137 ntBASIC5.87□□□□□ -1.47
SHC1P29353 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.87□□□□□ -1.47
SHC1P29353 OR6R1P-201ENST00000431838 940 ntBASIC5.87□□□□□ -1.47
SHC1P29353 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.87□□□□□ -1.47
SHC1P29353 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.87□□□□□ -1.47
SHC1P29353 AC099670.1-201ENST00000455141 783 ntBASIC5.87□□□□□ -1.47
SHC1P29353 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.87□□□□□ -1.47
SHC1P29353 HMGB3P14-201ENST00000494195 599 ntBASIC5.87□□□□□ -1.47
SHC1P29353 RN7SL612P-201ENST00000497704 295 ntBASIC5.87□□□□□ -1.47
SHC1P29353 AC138517.1-201ENST00000515724 568 ntBASIC5.87□□□□□ -1.47
SHC1P29353 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.87□□□□□ -1.47
SHC1P29353 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.87□□□□□ -1.47
SHC1P29353 MIR7854-201ENST00000620068 65 ntBASIC5.87□□□□□ -1.47
SHC1P29353 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.87□□□□□ -1.47
SHC1P29353 AC099654.11-201ENST00000638857 294 ntBASIC5.87□□□□□ -1.47
SHC1P29353 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.87□□□□□ -1.47
SHC1P29353 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 AC005702.3-201ENST00000585345 1447 ntBASIC5.87□□□□□ -1.47
SHC1P29353 AC217777.1-201ENST00000570034 1471 ntBASIC5.87□□□□□ -1.47
SHC1P29353 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHC1P29353 IMMTP1-201ENST00000435590 2219 ntBASIC5.87□□□□□ -1.47
SHC1P29353 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 AC068769.1-201ENST00000474767 2426 ntBASIC5.87□□□□□ -1.47
SHC1P29353 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.87□□□□□ -1.47
SHC1P29353 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
SHC1P29353 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 AC005225.5-201ENST00000623547 2225 ntBASIC5.86□□□□□ -1.47
SHC1P29353 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHC1P29353 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 MRPS21P5-201ENST00000417885 231 ntBASIC5.86□□□□□ -1.47
SHC1P29353 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 AC083862.1-201ENST00000427378 1242 ntBASIC5.86□□□□□ -1.47
SHC1P29353 BTG3P1-201ENST00000435859 716 ntBASIC5.86□□□□□ -1.47
SHC1P29353 ARMC4P1-201ENST00000438905 707 ntBASIC5.86□□□□□ -1.47
SHC1P29353 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.86□□□□□ -1.47
SHC1P29353 AL356121.1-201ENST00000442911 156 ntBASIC5.86□□□□□ -1.47
SHC1P29353 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.86□□□□□ -1.47
SHC1P29353 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 AC018645.1-201ENST00000505003 109 ntBASIC5.86□□□□□ -1.47
SHC1P29353 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 AL133399.1-201ENST00000527476 298 ntBASIC5.86□□□□□ -1.47
SHC1P29353 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 BTG1P1-201ENST00000540396 508 ntBASIC5.86□□□□□ -1.47
SHC1P29353 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 AC037479.1-201ENST00000558361 625 ntBASIC5.86□□□□□ -1.47
SHC1P29353 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.86□□□□□ -1.47
SHC1P29353 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHC1P29353 AC025171.4-201ENST00000607250 1047 ntBASIC5.86□□□□□ -1.47
SHC1P29353 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHC1P29353 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.86□□□□□ -1.47
SHC1P29353 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.86□□□□□ -1.47
SHC1P29353 AL157831.2-201ENST00000564681 3095 ntBASIC5.85□□□□□ -1.47
SHC1P29353 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHC1P29353 AC009135.2-201ENST00000624136 1768 ntBASIC5.85□□□□□ -1.47
SHC1P29353 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
SHC1P29353 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.85□□□□□ -1.47
SHC1P29353 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.85□□□□□ -1.47
SHC1P29353 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHC1P29353 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms