Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.94□□□□□ -1.3
RB1P06400 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.94□□□□□ -1.3
RB1P06400 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RB1P06400 NXT1P1-201ENST00000458481 316 ntBASIC6.94□□□□□ -1.3
RB1P06400 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.94□□□□□ -1.3
RB1P06400 PPIAP19-201ENST00000486414 492 ntBASIC6.94□□□□□ -1.3
RB1P06400 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 PRMT5P1-201ENST00000514351 598 ntBASIC6.94□□□□□ -1.3
RB1P06400 IGKV3D-25-201ENST00000519599 235 ntBASIC6.94□□□□□ -1.3
RB1P06400 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.94□□□□□ -1.3
RB1P06400 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 AC016144.1-201ENST00000548175 1087 ntBASIC6.94□□□□□ -1.3
RB1P06400 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.94□□□□□ -1.3
RB1P06400 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.94□□□□□ -1.3
RB1P06400 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 AC109309.2-201ENST00000612597 332 ntBASIC6.94□□□□□ -1.3
RB1P06400 MIR6886-201ENST00000619864 61 ntBASIC6.94□□□□□ -1.3
RB1P06400 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 SNORA17.5-201ENST00000630429 132 ntBASIC6.94□□□□□ -1.3
RB1P06400 AC061975.7-201ENST00000592016 2692 ntBASIC6.94□□□□□ -1.3
RB1P06400 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RB1P06400 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.94□□□□□ -1.3
RB1P06400 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.94□□□□□ -1.3
RB1P06400 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.94□□□□□ -1.3
RB1P06400 AC011379.1-201ENST00000508713 3025 ntBASIC6.94□□□□□ -1.3
RB1P06400 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.94□□□□□ -1.3
RB1P06400 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RB1P06400 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.94□□□□□ -1.3
RB1P06400 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
RB1P06400 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 RNA5SP510-201ENST00000364697 99 ntBASIC6.93□□□□□ -1.3
RB1P06400 MIR1204-201ENST00000408388 67 ntBASIC6.93□□□□□ -1.3
RB1P06400 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.93□□□□□ -1.3
RB1P06400 RN7SKP229-201ENST00000410465 302 ntBASIC6.93□□□□□ -1.3
RB1P06400 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 RPL23AP19-201ENST00000436229 369 ntBASIC6.93□□□□□ -1.3
RB1P06400 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 AC073109.1-201ENST00000445066 978 ntBASIC6.93□□□□□ -1.3
RB1P06400 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 RN7SL643P-201ENST00000471845 291 ntBASIC6.93□□□□□ -1.3
RB1P06400 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.93□□□□□ -1.3
RB1P06400 RPL12P31-201ENST00000478433 450 ntBASIC6.93□□□□□ -1.3
RB1P06400 AC093719.1-201ENST00000480427 441 ntBASIC6.93□□□□□ -1.3
RB1P06400 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 AC079905.1-201ENST00000549280 475 ntBASIC6.93□□□□□ -1.3
RB1P06400 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.93□□□□□ -1.3
RB1P06400 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.93□□□□□ -1.3
RB1P06400 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 LINC00556-201ENST00000569603 412 ntBASIC6.93□□□□□ -1.3
RB1P06400 AP005901.4-201ENST00000577336 569 ntBASIC6.93□□□□□ -1.3
RB1P06400 FO681491.1-202ENST00000623392 737 ntBASIC6.93□□□□□ -1.3
RB1P06400 AC018692.2-201ENST00000624130 348 ntBASIC6.93□□□□□ -1.3
RB1P06400 AC129915.3-201ENST00000634128 948 ntBASIC6.93□□□□□ -1.3
RB1P06400 AC103703.1-201ENST00000634783 663 ntBASIC6.93□□□□□ -1.3
RB1P06400 AC138627.1-204ENST00000641894 765 ntBASIC6.93□□□□□ -1.3
RB1P06400 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 AC027575.3-201ENST00000583058 2747 ntBASIC6.93□□□□□ -1.3
RB1P06400 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RB1P06400 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.93□□□□□ -1.3
RB1P06400 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
RB1P06400 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.93□□□□□ -1.3
RB1P06400 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.93□□□□□ -1.3
RB1P06400 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.93□□□□□ -1.3
RB1P06400 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.93□□□□□ -1.3
RB1P06400 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RB1P06400 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms