Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 RNU1-49P-201ENST00000363468 159 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 RNA5SP232-201ENST00000364144 119 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 RN7SKP86-201ENST00000410454 332 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 AL355355.1-201ENST00000442900 793 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 MORF4-201ENST00000447135 971 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 EEF1B2P3-201ENST00000447718 678 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 RN7SL221P-201ENST00000466190 281 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 RNA5SP473-201ENST00000516402 125 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 AC092865.1-201ENST00000544395 1023 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 AP001885.1-201ENST00000621658 558 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 AC073488.6-201ENST00000632293 754 ntBASIC9.1□□□□□ -0.95
SIN3AQ96ST3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SIN3AQ96ST3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AC011369.2-201ENST00000624423 1567 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 MIR433-201ENST00000384837 93 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AC108479.1-201ENST00000431142 427 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 RN7SL326P-201ENST00000477493 296 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 RPL12P30-201ENST00000488389 499 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 SNX18P25-201ENST00000510539 758 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 Y_RNA.710-201ENST00000516975 110 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AP005639.1-201ENST00000526939 192 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 RNU4ATAC-201ENST00000580972 127 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 MIR4701-201ENST00000583094 63 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 SMIM12P1-201ENST00000603004 274 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AL359091.2-201ENST00000609303 556 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 AL683826.1-201ENST00000624104 627 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 HDAC1P2-201ENST00000453661 1398 ntBASIC9.09□□□□□ -0.95
SIN3AQ96ST3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SIN3AQ96ST3 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 POU5F1P5-201ENST00000445059 658 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 AC103563.5-201ENST00000455643 364 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 RANP2-201ENST00000456833 229 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 RN7SL165P-201ENST00000477476 291 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 RPS27P20-201ENST00000492051 246 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 SNX18P24-201ENST00000505249 671 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 OR7E99P-201ENST00000505750 922 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 KHDC1P1-201ENST00000511053 508 ntBASIC9.08□□□□□ -0.96
SIN3AQ96ST3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.08□□□□□ -0.96
SIN3AQ96ST3 NPIPB1P-202ENST00000588786 828 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms