Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP3S2P59780 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.43□□□□□ -1.54
AP3S2P59780 AC008429.2-201ENST00000523057 864 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.43□□□□□ -1.54
AP3S2P59780 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.43□□□□□ -1.54
AP3S2P59780 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.43□□□□□ -1.54
AP3S2P59780 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC5.43□□□□□ -1.54
AP3S2P59780 OR4F28P-201ENST00000559128 938 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 CYP4A26P-201ENST00000563017 196 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.43□□□□□ -1.54
AP3S2P59780 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.43□□□□□ -1.54
AP3S2P59780 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
AP3S2P59780 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.43□□□□□ -1.54
AP3S2P59780 OR4F8P-201ENST00000589943 937 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP3S2P59780 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.43□□□□□ -1.54
AP3S2P59780 AC092032.1-201ENST00000603090 165 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 PTCHD3P1-201ENST00000612350 537 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 AC138904.2-201ENST00000614412 107 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 AL669830.1-201ENST00000621457 656 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 AL356585.10-201ENST00000641883 123 ntBASIC5.43□□□□□ -1.54
AP3S2P59780 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
AP3S2P59780 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.43□□□□□ -1.54
AP3S2P59780 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.43□□□□□ -1.54
AP3S2P59780 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP3S2P59780 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP3S2P59780 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP3S2P59780 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.43□□□□□ -1.54
AP3S2P59780 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP3S2P59780 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
AP3S2P59780 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
AP3S2P59780 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.42□□□□□ -1.54
AP3S2P59780 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 AC023886.2-201ENST00000321285 411 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 RNA5SP453-201ENST00000362503 119 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 HNRNPCP2-201ENST00000399515 881 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.42□□□□□ -1.54
AP3S2P59780 MTND1P10-201ENST00000426108 832 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 VTI1BP4-201ENST00000427516 527 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 IGLV3-4-201ENST00000432300 244 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC073410.1-201ENST00000435125 589 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.42□□□□□ -1.54
AP3S2P59780 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.42□□□□□ -1.54
AP3S2P59780 RPL26P30-201ENST00000453533 435 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 RN7SL571P-201ENST00000468302 295 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 RN7SL520P-201ENST00000474110 286 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 RN7SL338P-201ENST00000481467 293 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 RN7SL702P-201ENST00000488394 292 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 RN7SL284P-201ENST00000498823 275 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AL390198.2-201ENST00000510553 222 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC098679.3-203ENST00000514881 919 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.42□□□□□ -1.54
AP3S2P59780 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 ANP32BP1-202ENST00000568553 737 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 RN7SL208P-201ENST00000577964 296 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 MIR3189-201ENST00000578735 73 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.42□□□□□ -1.54
AP3S2P59780 AP000436.1-201ENST00000605239 800 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 AC106782.7-201ENST00000624024 418 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC133555.5-201ENST00000624430 418 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 AC099654.11-201ENST00000638857 294 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
AP3S2P59780 AC068870.3-201ENST00000625077 2536 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC092451.3-201ENST00000625067 1343 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 AC005005.4-201ENST00000623789 16698 ntBASIC5.42□□□□□ -1.54
AP3S2P59780 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP3S2P59780 AC007842.1-201ENST00000597336 2039 ntBASIC5.41□□□□□ -1.54
AP3S2P59780 AC093671.1-201ENST00000624981 2929 ntBASIC5.41□□□□□ -1.54
AP3S2P59780 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
AP3S2P59780 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
AP3S2P59780 AC027279.4-201ENST00000624371 2072 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms