Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC067805.1-201ENST00000559344 470 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXD12P35452 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD12P35452 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 RAB28P4-201ENST00000622233 665 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD12P35452 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 TMCC1P1-201ENST00000518897 1980 ntBASIC6.8□□□□□ -1.32
HOXD12P35452 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD12P35452 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
HOXD12P35452 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
HOXD12P35452 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD12P35452 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 AL662795.2-201ENST00000624252 3706 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 AL512329.1-201ENST00000404600 1592 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HOXD12P35452 OR5T3-201ENST00000303059 1023 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HOXD12P35452 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 RNA5SP512-201ENST00000364550 120 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXD12P35452 OR2W4P-201ENST00000406496 926 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 RN7SKP129-201ENST00000410288 299 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 USP9YP19-201ENST00000412165 485 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD12P35452 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXD12P35452 AL389925.1-201ENST00000432257 728 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 COL11A2P1-205ENST00000441798 676 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 OR51P1P-201ENST00000447547 942 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.79□□□□□ -1.32
HOXD12P35452 RN7SL216P-201ENST00000471607 298 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 RN7SL379P-201ENST00000479912 293 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC091874.2-201ENST00000505889 720 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC090568.1-201ENST00000509499 856 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC021146.10-201ENST00000515628 706 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC025857.1-201ENST00000525252 377 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD12P35452 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.79□□□□□ -1.32
HOXD12P35452 AC091167.5-201ENST00000605689 894 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AL352984.2-202ENST00000613699 155 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AL391597.1-201ENST00000618707 694 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC073592.7-201ENST00000623659 507 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 AC004943.1-203ENST00000624370 1074 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 AL358913.2-201ENST00000553881 1548 ntBASIC6.79□□□□□ -1.32
HOXD12P35452 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.79□□□□□ -1.32
HOXD12P35452 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
HOXD12P35452 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HOXD12P35452 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.79□□□□□ -1.32
HOXD12P35452 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HOXD12P35452 AL021877.2-201ENST00000624442 10684 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXD12P35452 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 RNA5SP140-201ENST00000364524 92 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 RNA5SP172-201ENST00000365061 118 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AC006511.2-201ENST00000388966 660 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 RNA5SP474-201ENST00000391234 90 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AC244452.1-201ENST00000413798 141 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms