Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AL451136.1-201ENST00000435399 325 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC010086.1-201ENST00000437359 1052 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AL590004.3-202ENST00000445883 451 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC005017.1-201ENST00000482002 490 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 RPS27P20-201ENST00000492051 246 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 RNA5SP441-201ENST00000516809 88 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC107958.1-201ENST00000556576 290 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 SMIM12P1-201ENST00000603004 274 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AL513218.1-201ENST00000606527 391 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 MIR6721-201ENST00000617181 87 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 AL591926.1-201ENST00000620542 217 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 MIR6806-201ENST00000622141 64 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 CDY10P-201ENST00000452415 1567 ntBASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.61□□□□□ -1.35
BHLHA9Q7RTU4 BIN2P1-201ENST00000504996 1530 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 RNA5SP333-201ENST00000363466 118 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 RNA5SP334-201ENST00000364825 118 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 CYP4F30P-202ENST00000420048 405 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 POU5F1P5-201ENST00000445059 658 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 EEF1B2P3-201ENST00000447718 678 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 SETP4-201ENST00000455717 868 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC093534.1-201ENST00000504977 132 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC096754.1-201ENST00000508904 818 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AP001858.2-201ENST00000536213 601 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC025423.2-201ENST00000537570 439 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC009120.3-201ENST00000563335 499 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 RN7SL230P-201ENST00000580835 303 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC087752.4-201ENST00000605911 462 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AL109924.4-201ENST00000623089 670 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AL683826.1-201ENST00000624104 627 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AC063923.1-201ENST00000478982 1619 ntBASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BHLHA9Q7RTU4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms