Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SMARCA4P51532 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 AK4P4-201ENST00000419465 646 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC11.04□□□□□ -0.64
SMARCA4P51532 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC11.04□□□□□ -0.64
SMARCA4P51532 NPM1P27-201ENST00000502784 830 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 SNORA58-201ENST00000505219 137 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC11.04□□□□□ -0.64
SMARCA4P51532 HMGN2P36-201ENST00000529541 409 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 LAPTM4BP2-201ENST00000604542 446 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 AC022919.1-201ENST00000624979 626 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC11.04□□□□□ -0.64
SMARCA4P51532 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMARCA4P51532 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMARCA4P51532 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMARCA4P51532 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMARCA4P51532 PCNAP4-201ENST00000532690 730 ntBASIC11.03□□□□□ -0.64
SMARCA4P51532 CU639417.4-201ENST00000623928 207 ntBASIC11.03□□□□□ -0.64
SMARCA4P51532 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMARCA4P51532 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC11.03□□□□□ -0.64
SMARCA4P51532 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMARCA4P51532 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC11.03□□□□□ -0.64
SMARCA4P51532 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC11.03□□□□□ -0.64
SMARCA4P51532 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMARCA4P51532 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC11.03□□□□□ -0.64
SMARCA4P51532 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC11.02□□□□□ -0.64
SMARCA4P51532 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC11.02□□□□□ -0.64
SMARCA4P51532 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC11.02□□□□□ -0.64
SMARCA4P51532 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMARCA4P51532 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMARCA4P51532 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMARCA4P51532 HMGB1P20-201ENST00000402555 677 ntBASIC11.02□□□□□ -0.64
SMARCA4P51532 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC11.02□□□□□ -0.64
SMARCA4P51532 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC11.02□□□□□ -0.64
SMARCA4P51532 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC11.02□□□□□ -0.64
SMARCA4P51532 AC010343.2-201ENST00000510162 224 ntBASIC11.02□□□□□ -0.64
SMARCA4P51532 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC11.02□□□□□ -0.64
SMARCA4P51532 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC11.02□□□□□ -0.64
SMARCA4P51532 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMARCA4P51532 AC006530.1-201ENST00000555980 571 ntBASIC11.02□□□□□ -0.64
SMARCA4P51532 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC11.02□□□□□ -0.64
SMARCA4P51532 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
SMARCA4P51532 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMARCA4P51532 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMARCA4P51532 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMARCA4P51532 WDR95P-201ENST00000425638 1542 ntBASIC11.02□□□□□ -0.65
SMARCA4P51532 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC11.02□□□□□ -0.65
SMARCA4P51532 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMARCA4P51532 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC11.02□□□□□ -0.65
SMARCA4P51532 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC11.02□□□□□ -0.65
SMARCA4P51532 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC11.02□□□□□ -0.65
SMARCA4P51532 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC11.02□□□□□ -0.65
SMARCA4P51532 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 AF117829.2-201ENST00000619538 361 ntBASIC11.02□□□□□ -0.65
SMARCA4P51532 AL035661.1-201ENST00000620459 1144 ntBASIC11.02□□□□□ -0.65
SMARCA4P51532 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMARCA4P51532 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMARCA4P51532 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMARCA4P51532 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SMARCA4P51532 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMARCA4P51532 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC11.01□□□□□ -0.65
SMARCA4P51532 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMARCA4P51532 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMARCA4P51532 FIGN-202ENST00000409634 746 ntTSL 5 BASIC11.01□□□□□ -0.65
SMARCA4P51532 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC11.01□□□□□ -0.65
SMARCA4P51532 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC11.01□□□□□ -0.65
SMARCA4P51532 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC11.01□□□□□ -0.65
SMARCA4P51532 RN7SL860P-201ENST00000473738 223 ntBASIC11.01□□□□□ -0.65
SMARCA4P51532 SIAH1P1-201ENST00000479411 923 ntBASIC11.01□□□□□ -0.65
SMARCA4P51532 RN7SL826P-201ENST00000479724 288 ntBASIC11.01□□□□□ -0.65
SMARCA4P51532 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC11.01□□□□□ -0.65
SMARCA4P51532 MIR6730-201ENST00000622213 67 ntBASIC11.01□□□□□ -0.65
SMARCA4P51532 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMARCA4P51532 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMARCA4P51532 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SMARCA4P51532 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC11□□□□□ -0.65
SMARCA4P51532 LARS-212ENST00000510191 3737 ntTSL 2 BASIC11□□□□□ -0.65
SMARCA4P51532 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC11□□□□□ -0.65
SMARCA4P51532 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC11□□□□□ -0.65
SMARCA4P51532 GUCY1B2-204ENST00000531898 1979 ntBASIC11□□□□□ -0.65
SMARCA4P51532 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC11□□□□□ -0.65
SMARCA4P51532 PABPC1P6-201ENST00000445594 1829 ntBASIC11□□□□□ -0.65
SMARCA4P51532 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC11□□□□□ -0.65
SMARCA4P51532 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SMARCA4P51532 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SMARCA4P51532 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC11□□□□□ -0.65
SMARCA4P51532 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC11□□□□□ -0.65
SMARCA4P51532 BIN2P1-201ENST00000504996 1530 ntBASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms