Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.13□□□□□ -1.11
COL15A1P39059 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 AC023490.2-201ENST00000359859 470 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 SNORD16-201ENST00000362803 99 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 RNA5SP510-201ENST00000364697 99 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 CDY17P-201ENST00000414121 1282 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 AL157884.1-201ENST00000424561 454 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 RN7SL174P-201ENST00000475578 289 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.13□□□□□ -1.11
COL15A1P39059 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.13□□□□□ -1.11
COL15A1P39059 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 AC011445.2-201ENST00000599274 173 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 AC073333.2-201ENST00000603589 769 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 AC009950.2-201ENST00000636548 183 ntBASIC8.13□□□□□ -1.11
COL15A1P39059 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
COL15A1P39059 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.13□□□□□ -1.11
COL15A1P39059 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.13□□□□□ -1.11
COL15A1P39059 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
COL15A1P39059 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL15A1P39059 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
COL15A1P39059 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 SNORA51.1-201ENST00000363243 140 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC8.12□□□□□ -1.11
COL15A1P39059 CDY8P-201ENST00000428380 1279 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 IGLV3-4-201ENST00000432300 244 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 RPL23AP19-201ENST00000436229 369 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 AC023141.3-201ENST00000436698 278 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 CDY20P-201ENST00000447528 1279 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.12□□□□□ -1.11
COL15A1P39059 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.12□□□□□ -1.11
COL15A1P39059 SCARNA21.2-201ENST00000516600 166 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.12□□□□□ -1.11
COL15A1P39059 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.12□□□□□ -1.11
COL15A1P39059 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.12□□□□□ -1.11
COL15A1P39059 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.12□□□□□ -1.11
COL15A1P39059 AC013731.1-201ENST00000604340 883 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.12□□□□□ -1.11
COL15A1P39059 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.12□□□□□ -1.11
COL15A1P39059 AL512652.1-201ENST00000619006 500 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 AC125238.2-201ENST00000430003 1440 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.12□□□□□ -1.11
COL15A1P39059 AC009120.2-204ENST00000621548 2032 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.12□□□□□ -1.11
COL15A1P39059 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.12□□□□□ -1.11
COL15A1P39059 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
COL15A1P39059 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
COL15A1P39059 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
COL15A1P39059 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.12□□□□□ -1.11
COL15A1P39059 CASC19-228ENST00000641414 1684 ntBASIC8.12□□□□□ -1.11
COL15A1P39059 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
COL15A1P39059 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
COL15A1P39059 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 AL008638.3-201ENST00000623027 5182 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.11□□□□□ -1.11
COL15A1P39059 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.11□□□□□ -1.11
COL15A1P39059 RPL12P16-201ENST00000431098 498 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.11□□□□□ -1.11
COL15A1P39059 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.11□□□□□ -1.11
COL15A1P39059 AC092824.1-201ENST00000483524 576 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 MTATP6P1-201ENST00000514057 681 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 RN7SKP238-201ENST00000516483 249 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.11□□□□□ -1.11
COL15A1P39059 IGLV3-6-201ENST00000523937 250 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.11□□□□□ -1.11
COL15A1P39059 AC068305.2-201ENST00000550567 1205 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 AC068768.2-201ENST00000602352 343 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.11□□□□□ -1.11
COL15A1P39059 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.11□□□□□ -1.11
COL15A1P39059 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.11□□□□□ -1.11
COL15A1P39059 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL15A1P39059 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
COL15A1P39059 AP003119.3-201ENST00000566747 4192 ntBASIC8.11□□□□□ -1.11
COL15A1P39059 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms