Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 AP005119.1-201ENST00000580956 292 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 AL162574.2-201ENST00000614618 657 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 MIR6826-201ENST00000617808 98 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 AC123769.1-201ENST00000530992 3192 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 NEPNP-201ENST00000404786 1371 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
POLR2AP24928 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
POLR2AP24928 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 RN7SKP162-201ENST00000363605 345 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.41□□□□□ -1.22
POLR2AP24928 NANOGP4-201ENST00000427230 913 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 AC084337.1-201ENST00000524809 686 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
POLR2AP24928 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 AC078880.4-201ENST00000617627 1749 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 AC119674.1-202ENST00000641333 1860 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
POLR2AP24928 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 AC027279.1-201ENST00000568885 4284 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 AP002833.3-201ENST00000625075 2265 ntBASIC7.41□□□□□ -1.22
POLR2AP24928 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.41□□□□□ -1.22
POLR2AP24928 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
POLR2AP24928 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
POLR2AP24928 SDHDP6-201ENST00000414693 480 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 RPL35AP31-201ENST00000418340 337 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.4□□□□□ -1.22
POLR2AP24928 EIF2S2P3-201ENST00000428356 999 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 GAPDHP23-201ENST00000444823 993 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.4□□□□□ -1.22
POLR2AP24928 UBA52P7-201ENST00000486088 380 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 AC006499.3-201ENST00000506077 748 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.4□□□□□ -1.22
POLR2AP24928 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.4□□□□□ -1.22
POLR2AP24928 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.4□□□□□ -1.22
POLR2AP24928 SUMO2P15-201ENST00000604285 278 ntBASIC7.4□□□□□ -1.22
POLR2AP24928 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.4□□□□□ -1.22
POLR2AP24928 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.4□□□□□ -1.22
POLR2AP24928 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.4□□□□□ -1.22
POLR2AP24928 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.4□□□□□ -1.22
POLR2AP24928 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.4□□□□□ -1.22
POLR2AP24928 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
POLR2AP24928 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.4□□□□□ -1.22
POLR2AP24928 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
POLR2AP24928 AC109780.1-201ENST00000451768 1344 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
POLR2AP24928 SNORA74A-201ENST00000364089 198 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
POLR2AP24928 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 RPS3AP2-201ENST00000407190 754 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.4□□□□□ -1.23
POLR2AP24928 EEF1B2P6-201ENST00000445713 673 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.4□□□□□ -1.23
POLR2AP24928 GEMIN2P1-201ENST00000454246 752 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 RPS27AP2-201ENST00000457576 465 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 RPSAP37-201ENST00000470913 821 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 AC008410.1-201ENST00000483777 339 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 SETP21-201ENST00000514799 892 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.4□□□□□ -1.23
POLR2AP24928 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.4□□□□□ -1.23
POLR2AP24928 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
POLR2AP24928 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
POLR2AP24928 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.4□□□□□ -1.23
POLR2AP24928 AC211433.2-201ENST00000608433 387 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 MIR7159-201ENST00000620587 66 ntBASIC7.4□□□□□ -1.23
POLR2AP24928 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
POLR2AP24928 AC011592.1-201ENST00000624647 3634 ntBASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms