Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7□□□□□ -1.29
SSR1P43307 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.99□□□□□ -1.29
SSR1P43307 DOCK11P1-201ENST00000553480 5932 ntBASIC6.99□□□□□ -1.29
SSR1P43307 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.99□□□□□ -1.29
SSR1P43307 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
SSR1P43307 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SSR1P43307 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.99□□□□□ -1.29
SSR1P43307 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 RNA5SP35-201ENST00000391257 129 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AL359694.1-201ENST00000403247 604 ntBASIC6.99□□□□□ -1.29
SSR1P43307 RN7SKP117-201ENST00000410175 264 ntBASIC6.99□□□□□ -1.29
SSR1P43307 RN7SKP296-201ENST00000411185 341 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.99□□□□□ -1.29
SSR1P43307 MGAT2P1-201ENST00000449718 797 ntBASIC6.99□□□□□ -1.29
SSR1P43307 SCDP1-201ENST00000455244 1081 ntBASIC6.99□□□□□ -1.29
SSR1P43307 RPSAP24-201ENST00000461543 873 ntBASIC6.99□□□□□ -1.29
SSR1P43307 RPS10P28-201ENST00000480396 498 ntBASIC6.99□□□□□ -1.29
SSR1P43307 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AC010442.1-201ENST00000515583 816 ntBASIC6.99□□□□□ -1.29
SSR1P43307 IGHV3-57-201ENST00000520143 280 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.99□□□□□ -1.29
SSR1P43307 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.99□□□□□ -1.29
SSR1P43307 AP004607.6-201ENST00000525033 1202 ntBASIC6.99□□□□□ -1.29
SSR1P43307 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.99□□□□□ -1.29
SSR1P43307 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.99□□□□□ -1.29
SSR1P43307 AC011611.6-201ENST00000547483 255 ntBASIC6.99□□□□□ -1.29
SSR1P43307 HNRNPCP1-201ENST00000556181 766 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AC139792.1-201ENST00000607051 647 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AC005393.1-201ENST00000617916 584 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AC006328.2-201ENST00000623198 397 ntBASIC6.99□□□□□ -1.29
SSR1P43307 AC012005.2-201ENST00000624333 397 ntBASIC6.99□□□□□ -1.29
SSR1P43307 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.99□□□□□ -1.29
SSR1P43307 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.99□□□□□ -1.29
SSR1P43307 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.99□□□□□ -1.29
SSR1P43307 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SSR1P43307 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.99□□□□□ -1.29
SSR1P43307 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSR1P43307 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.98□□□□□ -1.29
SSR1P43307 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.98□□□□□ -1.29
SSR1P43307 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.98□□□□□ -1.29
SSR1P43307 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.98□□□□□ -1.29
SSR1P43307 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.98□□□□□ -1.29
SSR1P43307 AC023245.2-201ENST00000530760 2978 ntBASIC6.98□□□□□ -1.29
SSR1P43307 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 RNU1-46P-201ENST00000384425 164 ntBASIC6.98□□□□□ -1.29
SSR1P43307 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 AC000089.1-201ENST00000424559 801 ntBASIC6.98□□□□□ -1.29
SSR1P43307 Z68868.1-201ENST00000429048 544 ntBASIC6.98□□□□□ -1.29
SSR1P43307 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.98□□□□□ -1.29
SSR1P43307 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.98□□□□□ -1.29
SSR1P43307 AC133965.1-201ENST00000452984 354 ntBASIC6.98□□□□□ -1.29
SSR1P43307 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 AC105391.1-201ENST00000503155 1045 ntBASIC6.98□□□□□ -1.29
SSR1P43307 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.98□□□□□ -1.29
SSR1P43307 AP005902.2-201ENST00000518393 307 ntBASIC6.98□□□□□ -1.29
SSR1P43307 CARSP2-201ENST00000520688 277 ntBASIC6.98□□□□□ -1.29
SSR1P43307 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.98□□□□□ -1.29
SSR1P43307 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.98□□□□□ -1.29
SSR1P43307 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.98□□□□□ -1.29
SSR1P43307 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 Z95327.3-201ENST00000610385 572 ntBASIC6.98□□□□□ -1.29
SSR1P43307 AC004241.2-201ENST00000614562 444 ntBASIC6.98□□□□□ -1.29
SSR1P43307 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.98□□□□□ -1.29
SSR1P43307 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.98□□□□□ -1.29
SSR1P43307 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 AC005332.9-201ENST00000620266 2921 ntBASIC6.98□□□□□ -1.29
SSR1P43307 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSR1P43307 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.98□□□□□ -1.29
SSR1P43307 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.97□□□□□ -1.29
SSR1P43307 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSR1P43307 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.97□□□□□ -1.29
SSR1P43307 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.97□□□□□ -1.29
SSR1P43307 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.97□□□□□ -1.29
SSR1P43307 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSR1P43307 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSR1P43307 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SSR1P43307 FAM32BP-201ENST00000344033 333 ntBASIC6.97□□□□□ -1.29
SSR1P43307 AL451061.1-201ENST00000407887 862 ntBASIC6.97□□□□□ -1.29
SSR1P43307 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms