Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FUNDC2P3-201ENST00000334716 533 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 RNU1-84P-201ENST00000365447 164 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 RN7SKP187-201ENST00000365536 330 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 PRELID1P1-201ENST00000403549 660 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 RN7SKP86-201ENST00000410454 332 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC017035.1-201ENST00000411999 1115 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC068522.1-201ENST00000482895 345 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC117500.1-201ENST00000497352 755 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 RPL5P11-201ENST00000498068 893 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC106822.1-201ENST00000502647 526 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC018645.1-201ENST00000505003 109 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 OR52K3P-201ENST00000531655 943 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 RN7SL230P-201ENST00000580835 303 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AL589765.6-201ENST00000601909 549 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 uc_338.29-201ENST00000615099 168 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 OR1N1-202ENST00000619659 939 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 AC010325.3-201ENST00000641084 394 ntBASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3CQ6NXT2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
H3F3CQ6NXT2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
H3F3CQ6NXT2 SMG1P5-202ENST00000529428 4219 ntBASIC6.09□□□□□ -1.44
H3F3CQ6NXT2 SMG1P2-201ENST00000566127 4221 ntBASIC6.09□□□□□ -1.44
H3F3CQ6NXT2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.09□□□□□ -1.44
H3F3CQ6NXT2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
H3F3CQ6NXT2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC034229.2-201ENST00000566945 2508 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 MTND5P12-201ENST00000502851 1449 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AP000641.1-201ENST00000531988 1639 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ASNSP6-201ENST00000592770 1618 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 PSMA6P1-201ENST00000400275 741 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 MIR541-201ENST00000401360 84 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AL049697.3-201ENST00000406493 982 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 RNU4-64P-201ENST00000410795 131 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC091390.2-201ENST00000432573 374 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 RPSAP32-201ENST00000432681 526 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC097359.1-201ENST00000447946 463 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 MARK2P8-201ENST00000476069 952 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC117394.1-201ENST00000477323 567 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 H3F3AP3-201ENST00000497682 407 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 HMGN1P16-201ENST00000508308 283 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC133552.4-201ENST00000576103 676 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC026898.1-201ENST00000586404 571 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 U1.41-201ENST00000617626 165 ntBASIC6.08□□□□□ -1.44
H3F3CQ6NXT2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms