Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SMARCA4P51532 AC235565.1-201ENST00000456962 1325 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
SMARCA4P51532 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SMARCA4P51532 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 RNA5SP46-201ENST00000362370 120 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 RN7SKP160-201ENST00000363804 340 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC11.11□□□□□ -0.63
SMARCA4P51532 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC11.11□□□□□ -0.63
SMARCA4P51532 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC11.11□□□□□ -0.63
SMARCA4P51532 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC11.11□□□□□ -0.63
SMARCA4P51532 AC092824.1-201ENST00000483524 576 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 AC093270.2-201ENST00000486157 792 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC11.11□□□□□ -0.63
SMARCA4P51532 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC11.11□□□□□ -0.63
SMARCA4P51532 MIR1273E-201ENST00000581165 102 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 AL137067.2-201ENST00000621202 131 ntBASIC11.11□□□□□ -0.63
SMARCA4P51532 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMARCA4P51532 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMARCA4P51532 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC11.1□□□□□ -0.63
SMARCA4P51532 AC062029.1-202ENST00000606164 3651 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 CLCA3P-203ENST00000490028 2781 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 OR7E25P-202ENST00000641088 5937 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMARCA4P51532 AL596448.1-201ENST00000415024 392 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 MORF4L1P5-201ENST00000433352 961 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 AL163193.1-201ENST00000444895 788 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 AC138866.2-201ENST00000508650 584 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC11.1□□□□□ -0.63
SMARCA4P51532 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC11.1□□□□□ -0.63
SMARCA4P51532 LRRC37A17P-201ENST00000570311 4693 ntBASIC11.1□□□□□ -0.63
SMARCA4P51532 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMARCA4P51532 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMARCA4P51532 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC11.1□□□□□ -0.63
SMARCA4P51532 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMARCA4P51532 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC11.1□□□□□ -0.63
SMARCA4P51532 AC016027.4-201ENST00000450866 277 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC084337.1-201ENST00000524809 686 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC008536.1-201ENST00000602872 669 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 AC079395.2-201ENST00000610982 737 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 OR7A1P-202ENST00000641542 1158 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SMARCA4P51532 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SMARCA4P51532 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC11.09□□□□□ -0.63
SMARCA4P51532 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMARCA4P51532 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMARCA4P51532 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC11.09□□□□□ -0.63
SMARCA4P51532 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMARCA4P51532 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
SMARCA4P51532 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMARCA4P51532 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC11.09□□□□□ -0.63
SMARCA4P51532 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMARCA4P51532 OR2M1P-201ENST00000318104 951 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 NPM1P4-201ENST00000414095 812 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 CYCSP22-201ENST00000517555 339 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC11.09□□□□□ -0.63
SMARCA4P51532 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC092865.1-201ENST00000544395 1023 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC11.09□□□□□ -0.63
SMARCA4P51532 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC11.09□□□□□ -0.63
SMARCA4P51532 MIR3189-201ENST00000578735 73 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC11.09□□□□□ -0.63
SMARCA4P51532 AC020916.2-201ENST00000591242 360 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 AL445670.1-201ENST00000618889 801 ntBASIC11.09□□□□□ -0.63
SMARCA4P51532 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
SMARCA4P51532 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
SMARCA4P51532 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SMARCA4P51532 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SMARCA4P51532 AL161901.1-201ENST00000624954 3425 ntBASIC11.08□□□□□ -0.64
SMARCA4P51532 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC11.08□□□□□ -0.64
SMARCA4P51532 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC11.08□□□□□ -0.64
SMARCA4P51532 PFN1P6-201ENST00000476786 399 ntBASIC11.08□□□□□ -0.64
SMARCA4P51532 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC11.08□□□□□ -0.64
SMARCA4P51532 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC11.08□□□□□ -0.64
SMARCA4P51532 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC11.08□□□□□ -0.64
SMARCA4P51532 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC11.08□□□□□ -0.64
SMARCA4P51532 AC211433.2-201ENST00000608433 387 ntBASIC11.08□□□□□ -0.64
SMARCA4P51532 TSHZ2-205ENST00000626626 670 ntBASIC11.08□□□□□ -0.64
SMARCA4P51532 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC11.08□□□□□ -0.64
SMARCA4P51532 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC11.08□□□□□ -0.64
SMARCA4P51532 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms