Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
SPTA1P02549 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SPTA1P02549 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SPTA1P02549 RPL24P7-201ENST00000399435 453 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 AC016908.1-201ENST00000442571 1219 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.96□□□□□ -1.46
SPTA1P02549 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.96□□□□□ -1.46
SPTA1P02549 RN7SL329P-201ENST00000467740 299 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 AL158068.1-201ENST00000506116 616 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 PABPC1P1-201ENST00000506347 591 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 PRMT5P1-201ENST00000514351 598 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 RNA5SP362-201ENST00000516048 118 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 SAA3P-201ENST00000533267 365 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 UBE2CP1-201ENST00000557130 554 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 AC129778.1-202ENST00000623812 261 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 AL591379.1-207ENST00000635982 261 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 CASC19-222ENST00000641321 1173 ntBASIC5.96□□□□□ -1.46
SPTA1P02549 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.96□□□□□ -1.46
SPTA1P02549 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC5.96□□□□□ -1.46
SPTA1P02549 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SPTA1P02549 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 AL136531.3-201ENST00000624378 3658 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AKAP17BP-201ENST00000431706 2719 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AL359396.1-201ENST00000623151 2376 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 MAPK10-357ENST00000641831 2858 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 AC018717.1-201ENST00000457712 1505 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SPTA1P02549 RNU6-1055P-201ENST00000391085 107 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 RNU4-34P-201ENST00000410431 124 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 LSM3P3-201ENST00000436601 306 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SPTA1P02549 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.95□□□□□ -1.46
SPTA1P02549 AC040162.2-201ENST00000573092 157 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.95□□□□□ -1.46
SPTA1P02549 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.95□□□□□ -1.46
SPTA1P02549 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.95□□□□□ -1.46
SPTA1P02549 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC5.95□□□□□ -1.46
SPTA1P02549 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
SPTA1P02549 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SPTA1P02549 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SPTA1P02549 MTCO1P28-201ENST00000574177 1528 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SPTA1P02549 RNA5SP477-201ENST00000362639 119 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.95□□□□□ -1.46
SPTA1P02549 RPL34P19-201ENST00000415903 342 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.95□□□□□ -1.46
SPTA1P02549 PIP5K1P2-201ENST00000437005 1120 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AL645936.1-201ENST00000441979 518 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.95□□□□□ -1.46
SPTA1P02549 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.95□□□□□ -1.46
SPTA1P02549 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 RBBP4P1-201ENST00000502424 1276 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.95□□□□□ -1.46
SPTA1P02549 CTSLP2-201ENST00000580501 394 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 RN7SL787P-201ENST00000613000 284 ntBASIC5.95□□□□□ -1.46
SPTA1P02549 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.95□□□□□ -1.46
SPTA1P02549 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SPTA1P02549 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC5.94□□□□□ -1.46
SPTA1P02549 AC241584.2-201ENST00000637142 2090 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC5.94□□□□□ -1.46
SPTA1P02549 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC5.94□□□□□ -1.46
SPTA1P02549 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.94□□□□□ -1.46
SPTA1P02549 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 RN7SKP115-201ENST00000363177 317 ntBASIC5.94□□□□□ -1.46
SPTA1P02549 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SPTA1P02549 RN7SKP271-201ENST00000410528 320 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms