Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RAD17P2-201ENST00000451754 1977 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 EEF1A1P9-201ENST00000514975 1383 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC112243.1-201ENST00000623949 3851 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 RNU1-49P-201ENST00000363468 159 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 OR52I1-201ENST00000450052 1050 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 SNX18P24-201ENST00000505249 671 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AP002345.2-201ENST00000609961 904 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC008691.1-209ENST00000642094 814 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 GUCY1B2-204ENST00000531898 1979 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HFM1A2PYH4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 SMARCE1P6-201ENST00000398372 1216 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 GCNT1P4-201ENST00000404096 329 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 AL451136.1-201ENST00000435399 325 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 OR3D1P-201ENST00000438288 955 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 AL645936.1-201ENST00000441979 518 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 AC092967.1-201ENST00000449016 481 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 RPL12P30-201ENST00000488389 499 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 RN7SKP35-201ENST00000517210 151 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 FAU-203ENST00000525297 355 ntTSL 5 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 AP001823.1-201ENST00000604056 1003 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 AL513218.1-201ENST00000606527 391 ntBASIC9.38□□□□□ -0.91
HFM1A2PYH4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.38□□□□□ -0.91
HFM1A2PYH4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 AL445238.1-204ENST00000400311 463 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 SNORA77.2-201ENST00000408571 112 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 FABP5P2-201ENST00000439042 408 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 NPIPB14P-203ENST00000532298 987 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 AC068768.2-201ENST00000602352 343 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 AC108865.2-201ENST00000606881 432 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC9.37□□□□□ -0.91
HFM1A2PYH4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
HFM1A2PYH4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HFM1A2PYH4 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
HFM1A2PYH4 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC9.36□□□□□ -0.91
HFM1A2PYH4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 TNPO1P2-201ENST00000426249 2665 ntBASIC9.36□□□□□ -0.91
HFM1A2PYH4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HFM1A2PYH4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
HFM1A2PYH4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
HFM1A2PYH4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms