Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AL020997.2-201ENST00000602607 184 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC090510.2-201ENST00000617465 629 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AL445670.1-201ENST00000618889 801 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AL139148.1-201ENST00000427122 680 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 NDUFS5P5-201ENST00000437256 321 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AL583856.1-201ENST00000454078 1101 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC005532.2-201ENST00000467154 373 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AL109618.2-201ENST00000605527 211 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC245014.3-201ENST00000618589 347 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 CASC19-208ENST00000641056 1292 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 CASC19-227ENST00000641411 1285 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 SMG1P5-202ENST00000529428 4219 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 SMG1P2-201ENST00000566127 4221 ntBASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.01□□□□□ -1.45
CHD8Q9HCK8 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC6□□□□□ -1.45
CHD8Q9HCK8 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHD8Q9HCK8 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHD8Q9HCK8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 SUMO2P7-201ENST00000511179 285 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 IGKV2-23-201ENST00000518729 323 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 CU639417.4-201ENST00000623928 207 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CHD8Q9HCK8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHD8Q9HCK8 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHD8Q9HCK8 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 OFD1P15Y-201ENST00000411536 1392 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 OR7E101P-201ENST00000400428 513 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6□□□□□ -1.45
CHD8Q9HCK8 RN7SKP161-201ENST00000411110 305 ntBASIC6□□□□□ -1.45
CHD8Q9HCK8 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6□□□□□ -1.45
CHD8Q9HCK8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6□□□□□ -1.45
CHD8Q9HCK8 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms