Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.35□□□□□ -1.55
LMO4P61968 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC5.35□□□□□ -1.55
LMO4P61968 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LMO4P61968 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
LMO4P61968 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LMO4P61968 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 SAGE3P-201ENST00000619800 1635 ntBASIC5.34□□□□□ -1.55
LMO4P61968 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 HCFC2P1-201ENST00000392864 1592 ntBASIC5.34□□□□□ -1.55
LMO4P61968 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 RNA5SP433-201ENST00000364491 114 ntBASIC5.34□□□□□ -1.55
LMO4P61968 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AL354707.3-201ENST00000427308 331 ntBASIC5.34□□□□□ -1.55
LMO4P61968 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.34□□□□□ -1.55
LMO4P61968 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 PMS2P9-201ENST00000441237 515 ntBASIC5.34□□□□□ -1.55
LMO4P61968 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 CXCR2P1-202ENST00000443392 1074 ntBASIC5.34□□□□□ -1.55
LMO4P61968 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.34□□□□□ -1.55
LMO4P61968 Z83838.1-202ENST00000456225 839 ntBASIC5.34□□□□□ -1.55
LMO4P61968 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AC022206.1-201ENST00000495947 347 ntBASIC5.34□□□□□ -1.55
LMO4P61968 SNX18P25-201ENST00000510539 758 ntBASIC5.34□□□□□ -1.55
LMO4P61968 RNA5SP206-201ENST00000516703 121 ntBASIC5.34□□□□□ -1.55
LMO4P61968 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AC036111.2-201ENST00000533247 901 ntBASIC5.34□□□□□ -1.55
LMO4P61968 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.34□□□□□ -1.55
LMO4P61968 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 NDUFA5P11-201ENST00000567995 343 ntBASIC5.34□□□□□ -1.55
LMO4P61968 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.34□□□□□ -1.55
LMO4P61968 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.34□□□□□ -1.55
LMO4P61968 AC079315.1-201ENST00000602952 623 ntBASIC5.34□□□□□ -1.55
LMO4P61968 RPSAP75-201ENST00000605848 301 ntBASIC5.34□□□□□ -1.55
LMO4P61968 SNORA74.4-201ENST00000607595 199 ntBASIC5.34□□□□□ -1.55
LMO4P61968 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 AC012653.2-201ENST00000621880 420 ntBASIC5.34□□□□□ -1.55
LMO4P61968 AL512356.3-201ENST00000623005 461 ntBASIC5.34□□□□□ -1.55
LMO4P61968 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.34□□□□□ -1.55
LMO4P61968 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC5.34□□□□□ -1.55
LMO4P61968 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
LMO4P61968 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LMO4P61968 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
LMO4P61968 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.34□□□□□ -1.56
LMO4P61968 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LMO4P61968 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
LMO4P61968 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LMO4P61968 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.34□□□□□ -1.56
LMO4P61968 AC010401.2-201ENST00000575137 4934 ntBASIC5.34□□□□□ -1.56
LMO4P61968 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
LMO4P61968 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 AC104966.1-201ENST00000467010 1464 ntBASIC5.33□□□□□ -1.56
LMO4P61968 AC125238.2-201ENST00000430003 1440 ntBASIC5.33□□□□□ -1.56
LMO4P61968 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC5.33□□□□□ -1.56
LMO4P61968 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
LMO4P61968 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMO4P61968 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms