Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC091167.5-201ENST00000605689 894 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.83□□□□□ -1.16
RHBDL3P58872 CUBNP3-201ENST00000457461 1784 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 ZNF658B-201ENST00000602828 3408 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC138915.4-201ENST00000565549 4147 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 ASNSP6-201ENST00000592770 1618 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 RPL11P4-201ENST00000332269 436 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 MIR188-201ENST00000385034 86 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 RBBP4P5-201ENST00000398583 1266 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 RN7SL834P-201ENST00000461450 286 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 RN7SL561P-201ENST00000488553 281 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AL162632.2-201ENST00000553933 399 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.82□□□□□ -1.16
RHBDL3P58872 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RHBDL3P58872 RN7SL475P-201ENST00000583379 298 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RHBDL3P58872 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 SMIM12P1-201ENST00000603004 274 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 AL356986.1-201ENST00000604085 341 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.82□□□□□ -1.16
RHBDL3P58872 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 MIR1910-201ENST00000636955 80 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RHBDL3P58872 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
RHBDL3P58872 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RHBDL3P58872 MTCO1P25-201ENST00000414449 1799 ntBASIC7.82□□□□□ -1.16
RHBDL3P58872 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RHBDL3P58872 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 AC005839.1-201ENST00000624148 3213 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.81□□□□□ -1.16
RHBDL3P58872 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 MAPK10-287ENST00000641217 3037 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RHBDL3P58872 DHFRP2-201ENST00000414224 547 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.81□□□□□ -1.16
RHBDL3P58872 AC002069.1-201ENST00000429649 1159 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.81□□□□□ -1.16
RHBDL3P58872 MED28P4-201ENST00000433137 572 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.81□□□□□ -1.16
RHBDL3P58872 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.81□□□□□ -1.16
RHBDL3P58872 GM2AP2-201ENST00000491764 562 ntBASIC7.81□□□□□ -1.16
RHBDL3P58872 RPL5P11-201ENST00000498068 893 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms