Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.87□□□□□ -1.47
H3F3AP84243 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.87□□□□□ -1.47
H3F3AP84243 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
H3F3AP84243 AC009779.8-201ENST00000641684 4384 ntBASIC5.87□□□□□ -1.47
H3F3AP84243 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
H3F3AP84243 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
H3F3AP84243 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
H3F3AP84243 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.86□□□□□ -1.47
H3F3AP84243 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.86□□□□□ -1.47
H3F3AP84243 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 NEK2P2-201ENST00000438441 1338 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
H3F3AP84243 SNORA7A-201ENST00000384765 139 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 VIM2P-201ENST00000402383 1294 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 RPL5P20-201ENST00000403848 896 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.86□□□□□ -1.47
H3F3AP84243 AC092106.2-201ENST00000436597 487 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AL034369.1-201ENST00000453808 477 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 RN7SL502P-201ENST00000481857 290 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AC092824.1-201ENST00000483524 576 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AC131392.1-201ENST00000506490 633 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AC139713.1-202ENST00000512366 460 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.86□□□□□ -1.47
H3F3AP84243 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.86□□□□□ -1.47
H3F3AP84243 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.86□□□□□ -1.47
H3F3AP84243 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
H3F3AP84243 RN7SL208P-201ENST00000577964 296 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 PCA3_2.1-201ENST00000612507 409 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AC116165.3-201ENST00000614524 400 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AL138693.1-201ENST00000622219 129 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.86□□□□□ -1.47
H3F3AP84243 AC005332.9-201ENST00000620266 2921 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
H3F3AP84243 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
H3F3AP84243 AP000547.3-204ENST00000588548 2523 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
H3F3AP84243 BRD7P1-201ENST00000557705 1915 ntBASIC5.86□□□□□ -1.47
H3F3AP84243 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
H3F3AP84243 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
H3F3AP84243 OLMALINC-203ENST00000641087 3779 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 AC007998.4-201ENST00000612496 2533 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H3F3AP84243 AL023284.3-201ENST00000407767 334 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 UBTFL2-201ENST00000411859 1191 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 MRPS21P5-201ENST00000417885 231 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.85□□□□□ -1.47
H3F3AP84243 RPL23AP85-201ENST00000421838 433 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 AC128677.1-201ENST00000436016 442 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.85□□□□□ -1.47
H3F3AP84243 AC074386.1-206ENST00000487102 761 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 RPL19P11-201ENST00000495944 589 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.85□□□□□ -1.47
H3F3AP84243 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.85□□□□□ -1.47
H3F3AP84243 HMGN1P26-201ENST00000558737 303 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.85□□□□□ -1.47
H3F3AP84243 AC092718.4-201ENST00000566639 716 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 AC097467.4-201ENST00000605504 141 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.85□□□□□ -1.47
H3F3AP84243 MIR6885-201ENST00000612241 66 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 U1.41-201ENST00000617626 165 ntBASIC5.85□□□□□ -1.47
H3F3AP84243 CLUHP10-201ENST00000631979 980 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 860.8 ms