Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.76□□□□□ -1.33
HTTP42858 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.76□□□□□ -1.33
HTTP42858 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
HTTP42858 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.76□□□□□ -1.33
HTTP42858 RPL36P18-201ENST00000419316 318 ntBASIC6.76□□□□□ -1.33
HTTP42858 RPA2P3-201ENST00000533268 770 ntBASIC6.76□□□□□ -1.33
HTTP42858 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.76□□□□□ -1.33
HTTP42858 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.76□□□□□ -1.33
HTTP42858 HNRNPCP1-201ENST00000556181 766 ntBASIC6.76□□□□□ -1.33
HTTP42858 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.76□□□□□ -1.33
HTTP42858 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
HTTP42858 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
HTTP42858 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 RN7SKP128-201ENST00000364270 303 ntBASIC6.75□□□□□ -1.33
HTTP42858 OR2W4P-201ENST00000406496 926 ntBASIC6.75□□□□□ -1.33
HTTP42858 AC008753.1-201ENST00000423096 284 ntBASIC6.75□□□□□ -1.33
HTTP42858 AL450023.1-201ENST00000450868 751 ntBASIC6.75□□□□□ -1.33
HTTP42858 AC009220.1-201ENST00000451614 275 ntBASIC6.75□□□□□ -1.33
HTTP42858 RAB28P2-201ENST00000454299 641 ntBASIC6.75□□□□□ -1.33
HTTP42858 RANP2-201ENST00000456833 229 ntBASIC6.75□□□□□ -1.33
HTTP42858 RN7SL561P-201ENST00000488553 281 ntBASIC6.75□□□□□ -1.33
HTTP42858 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.75□□□□□ -1.33
HTTP42858 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.75□□□□□ -1.33
HTTP42858 MRPS16P1-201ENST00000523462 412 ntBASIC6.75□□□□□ -1.33
HTTP42858 TXNP4-201ENST00000575018 310 ntBASIC6.75□□□□□ -1.33
HTTP42858 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.75□□□□□ -1.33
HTTP42858 AL953862.2-201ENST00000603089 820 ntBASIC6.75□□□□□ -1.33
HTTP42858 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 AC126915.2-201ENST00000610957 190 ntBASIC6.75□□□□□ -1.33
HTTP42858 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 MIR8080-201ENST00000622224 89 ntBASIC6.75□□□□□ -1.33
HTTP42858 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 AC011455.2-201ENST00000599320 3336 ntBASIC6.75□□□□□ -1.33
HTTP42858 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 AC074141.1-201ENST00000588129 2995 ntBASIC6.75□□□□□ -1.33
HTTP42858 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 RN7SKP104-201ENST00000362605 328 ntBASIC6.75□□□□□ -1.33
HTTP42858 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.75□□□□□ -1.33
HTTP42858 Z84478.1-201ENST00000438230 1219 ntBASIC6.75□□□□□ -1.33
HTTP42858 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 GSTP1P1-201ENST00000548078 319 ntBASIC6.75□□□□□ -1.33
HTTP42858 OR11J2P-201ENST00000555298 907 ntBASIC6.75□□□□□ -1.33
HTTP42858 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 OR4C1P-202ENST00000641065 1569 ntBASIC6.75□□□□□ -1.33
HTTP42858 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.75□□□□□ -1.33
HTTP42858 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
HTTP42858 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HTTP42858 AL157831.2-201ENST00000564681 3095 ntBASIC6.74□□□□□ -1.33
HTTP42858 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.74□□□□□ -1.33
HTTP42858 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.74□□□□□ -1.33
HTTP42858 RN7SKP213-201ENST00000410746 298 ntBASIC6.74□□□□□ -1.33
HTTP42858 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.74□□□□□ -1.33
HTTP42858 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.74□□□□□ -1.33
HTTP42858 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.74□□□□□ -1.33
HTTP42858 AC023245.1-201ENST00000468501 517 ntBASIC6.74□□□□□ -1.33
HTTP42858 RPS3AP15-201ENST00000483874 781 ntBASIC6.74□□□□□ -1.33
HTTP42858 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 AC106800.2-201ENST00000514009 1103 ntBASIC6.74□□□□□ -1.33
HTTP42858 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.74□□□□□ -1.33
HTTP42858 AC127024.8-201ENST00000623719 2094 ntBASIC6.74□□□□□ -1.33
HTTP42858 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.74□□□□□ -1.33
HTTP42858 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HTTP42858 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HTTP42858 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms