Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL3L1P16619 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 HTR1DP1-201ENST00000616500 888 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AL132640.3-201ENST00000630473 177 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC02495-203ENST00000636704 242 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AL359694.2-201ENST00000567753 1615 ntBASIC5.32□□□□□ -1.56
CCL3L1P16619 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.32□□□□□ -1.56
CCL3L1P16619 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCL3L1P16619 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 PARP4P1-201ENST00000435945 2337 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL3L1P16619 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC062029.1-202ENST00000606164 3651 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AC016251.2-201ENST00000623393 3089 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL3L1P16619 RPL31P11-201ENST00000426558 1558 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCL3L1P16619 RN7SKP184-201ENST00000362348 333 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 RNA5SP333-201ENST00000363466 118 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 RNA5SP334-201ENST00000364825 118 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AL050335.1-201ENST00000396909 869 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AL034417.1-201ENST00000399343 800 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 MRPS21P5-201ENST00000417885 231 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL3L1P16619 CYCSP52-201ENST00000422857 310 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 COX4I1P2-201ENST00000447446 547 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC004890.1-201ENST00000461005 181 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 RN7SL39P-201ENST00000462264 297 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 RN7SL612P-201ENST00000497704 295 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC096754.1-201ENST00000508904 818 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AP004607.6-201ENST00000525033 1202 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL3L1P16619 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.31□□□□□ -1.56
CCL3L1P16619 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL3L1P16619 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL3L1P16619 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 MIR3157-201ENST00000578688 85 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC012368.3-201ENST00000604190 219 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AC073046.2-201ENST00000604756 527 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL3L1P16619 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL3L1P16619 MIR6823-201ENST00000622118 61 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 AC089999.3-201ENST00000622440 577 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL3L1P16619 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCL3L1P16619 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL3L1P16619 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 CAST-222ENST00000508579 1758 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC105749.1-201ENST00000631338 2008 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL3L1P16619 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL3L1P16619 AC007114.2-201ENST00000576014 4281 ntBASIC5.31□□□□□ -1.56
CCL3L1P16619 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 AC112243.1-201ENST00000623949 3851 ntBASIC5.3□□□□□ -1.56
CCL3L1P16619 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCL3L1P16619 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CCL3L1P16619 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.3□□□□□ -1.56
CCL3L1P16619 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCL3L1P16619 RNA5SP485-201ENST00000365053 119 ntBASIC5.3□□□□□ -1.56
CCL3L1P16619 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCL3L1P16619 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL3L1P16619 AC003045.1-201ENST00000398779 713 ntBASIC5.3□□□□□ -1.56
CCL3L1P16619 VIM2P-201ENST00000402383 1294 ntBASIC5.3□□□□□ -1.56
CCL3L1P16619 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.3□□□□□ -1.56
CCL3L1P16619 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL3L1P16619 GTF3AP6-201ENST00000432585 986 ntBASIC5.3□□□□□ -1.56
CCL3L1P16619 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL3L1P16619 AL451136.1-201ENST00000435399 325 ntBASIC5.3□□□□□ -1.56
CCL3L1P16619 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL3L1P16619 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL3L1P16619 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms