Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RETP07949 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RETP07949 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 RNA5SP321-201ENST00000362722 111 ntBASIC6.76□□□□□ -1.33
RETP07949 SSR1P1-201ENST00000407630 814 ntBASIC6.76□□□□□ -1.33
RETP07949 RN7SKP229-201ENST00000410465 302 ntBASIC6.76□□□□□ -1.33
RETP07949 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 RPL36P18-201ENST00000419316 318 ntBASIC6.76□□□□□ -1.33
RETP07949 AL121916.1-201ENST00000429405 308 ntBASIC6.76□□□□□ -1.33
RETP07949 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 LSM3P3-201ENST00000436601 306 ntBASIC6.76□□□□□ -1.33
RETP07949 HMGN1P6-201ENST00000438508 291 ntBASIC6.76□□□□□ -1.33
RETP07949 RPL5P7-201ENST00000444235 813 ntBASIC6.76□□□□□ -1.33
RETP07949 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.76□□□□□ -1.33
RETP07949 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.76□□□□□ -1.33
RETP07949 RN7SL101P-201ENST00000496350 279 ntBASIC6.76□□□□□ -1.33
RETP07949 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RETP07949 AC108103.1-201ENST00000511286 446 ntBASIC6.76□□□□□ -1.33
RETP07949 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.76□□□□□ -1.33
RETP07949 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.76□□□□□ -1.33
RETP07949 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.76□□□□□ -1.33
RETP07949 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 AC091133.5-201ENST00000603088 301 ntBASIC6.76□□□□□ -1.33
RETP07949 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.76□□□□□ -1.33
RETP07949 AL096712.1-201ENST00000614561 159 ntBASIC6.76□□□□□ -1.33
RETP07949 MIR6886-201ENST00000619864 61 ntBASIC6.76□□□□□ -1.33
RETP07949 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.76□□□□□ -1.33
RETP07949 AL512329.1-201ENST00000404600 1592 ntBASIC6.76□□□□□ -1.33
RETP07949 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.76□□□□□ -1.33
RETP07949 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
RETP07949 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
RETP07949 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.76□□□□□ -1.33
RETP07949 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.75□□□□□ -1.33
RETP07949 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.75□□□□□ -1.33
RETP07949 ZNF806-201ENST00000438300 1774 ntBASIC6.75□□□□□ -1.33
RETP07949 KARSP1-201ENST00000451871 1752 ntBASIC6.75□□□□□ -1.33
RETP07949 SMG1P5-202ENST00000529428 4219 ntBASIC6.75□□□□□ -1.33
RETP07949 SMG1P2-201ENST00000566127 4221 ntBASIC6.75□□□□□ -1.33
RETP07949 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RETP07949 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RETP07949 RNA5SP474-201ENST00000391234 90 ntBASIC6.75□□□□□ -1.33
RETP07949 GCNT1P4-201ENST00000404096 329 ntBASIC6.75□□□□□ -1.33
RETP07949 AL512422.1-201ENST00000407033 553 ntBASIC6.75□□□□□ -1.33
RETP07949 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.75□□□□□ -1.33
RETP07949 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.75□□□□□ -1.33
RETP07949 MRPS21P3-201ENST00000436696 262 ntBASIC6.75□□□□□ -1.33
RETP07949 UBBP5-201ENST00000446970 266 ntBASIC6.75□□□□□ -1.33
RETP07949 HMGB1P7-201ENST00000450921 612 ntBASIC6.75□□□□□ -1.33
RETP07949 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.75□□□□□ -1.33
RETP07949 AC084754.1-201ENST00000463466 464 ntBASIC6.75□□□□□ -1.33
RETP07949 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.75□□□□□ -1.33
RETP07949 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.75□□□□□ -1.33
RETP07949 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.75□□□□□ -1.33
RETP07949 RPL41P2-201ENST00000544920 409 ntBASIC6.75□□□□□ -1.33
RETP07949 ACTG1P15-201ENST00000570019 1063 ntBASIC6.75□□□□□ -1.33
RETP07949 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.75□□□□□ -1.33
RETP07949 AC008555.7-201ENST00000605008 583 ntBASIC6.75□□□□□ -1.33
RETP07949 AL513218.1-201ENST00000606527 391 ntBASIC6.75□□□□□ -1.33
RETP07949 AC108865.2-201ENST00000606881 432 ntBASIC6.75□□□□□ -1.33
RETP07949 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.75□□□□□ -1.33
RETP07949 AC109309.2-201ENST00000612597 332 ntBASIC6.75□□□□□ -1.33
RETP07949 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 AL035425.4-201ENST00000624509 1063 ntBASIC6.75□□□□□ -1.33
RETP07949 SNX18P12-201ENST00000624821 759 ntBASIC6.75□□□□□ -1.33
RETP07949 UG0898H09-202ENST00000623646 7040 ntBASIC6.75□□□□□ -1.33
RETP07949 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RETP07949 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.75□□□□□ -1.33
RETP07949 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RETP07949 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms