Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 STAG3L4-201ENST00000352103 530 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 OR11H13P-201ENST00000359695 979 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 CYP4F30P-202ENST00000420048 405 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 AC093166.3-201ENST00000448785 303 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 RN7SL168P-201ENST00000463821 279 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 AC122718.2-201ENST00000505325 591 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 CYP2G2P-201ENST00000594920 1485 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 TNPO1P2-201ENST00000426249 2665 ntBASIC9.94□□□□□ -0.82
VPS8Q8N3P4 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS8Q8N3P4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 HSPD1P4-201ENST00000547203 1702 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 PNKDP1-201ENST00000435914 430 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 RN7SL254P-201ENST00000460609 284 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AC002519.2-203ENST00000567043 837 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AC134669.1-201ENST00000581275 672 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AL513218.1-201ENST00000606527 391 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 AL132640.3-201ENST00000630473 177 ntBASIC9.93□□□□□ -0.82
VPS8Q8N3P4 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS8Q8N3P4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC092967.1-201ENST00000449016 481 ntBASIC9.92□□□□□ -0.82
VPS8Q8N3P4 HIGD1AP16-201ENST00000450986 258 ntBASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 SNX18P24-201ENST00000505249 671 ntBASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC095052.1-201ENST00000509955 863 ntBASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC084121.1-201ENST00000533882 835 ntBASIC9.92□□□□□ -0.82
VPS8Q8N3P4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AP002345.2-201ENST00000609961 904 ntBASIC9.92□□□□□ -0.82
VPS8Q8N3P4 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS8Q8N3P4 AC005618.1-201ENST00000606901 3148 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 RN7SKP240-201ENST00000410583 375 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 FABP5P2-201ENST00000439042 408 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC097463.1-201ENST00000447288 481 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 RPA2P3-201ENST00000533268 770 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC006512.2-201ENST00000543250 486 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 GUCY1B2-204ENST00000531898 1979 ntBASIC9.91□□□□□ -0.82
VPS8Q8N3P4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS8Q8N3P4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms