Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.5□□□□□ -1.21
CCNA1P78396 TMEM75-201ENST00000624314 2165 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.5□□□□□ -1.21
CCNA1P78396 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 COX6B1P3-201ENST00000312310 260 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCNA1P78396 LCN1P2-201ENST00000372030 223 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 MIR199B-201ENST00000384849 110 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AC004386.1-201ENST00000393214 761 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 AC009500.1-201ENST00000420684 583 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCNA1P78396 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 AL645936.1-201ENST00000441979 518 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AC010240.2-201ENST00000445363 1205 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 SSX8-201ENST00000506270 579 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 AC090115.2-201ENST00000548060 883 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.5□□□□□ -1.21
CCNA1P78396 AC004232.1-201ENST00000571388 208 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 RPSAP75-201ENST00000605848 301 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AC018692.2-201ENST00000624130 348 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.5□□□□□ -1.21
CCNA1P78396 AC073488.6-201ENST00000632293 754 ntBASIC7.5□□□□□ -1.21
CCNA1P78396 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.5□□□□□ -1.21
CCNA1P78396 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCNA1P78396 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.5□□□□□ -1.21
CCNA1P78396 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCNA1P78396 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCNA1P78396 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.5□□□□□ -1.21
CCNA1P78396 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.49□□□□□ -1.21
CCNA1P78396 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.49□□□□□ -1.21
CCNA1P78396 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CCNA1P78396 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 RNA5SP188-201ENST00000362916 129 ntBASIC7.49□□□□□ -1.21
CCNA1P78396 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.49□□□□□ -1.21
CCNA1P78396 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.49□□□□□ -1.21
CCNA1P78396 AC068228.1-201ENST00000461723 211 ntBASIC7.49□□□□□ -1.21
CCNA1P78396 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.49□□□□□ -1.21
CCNA1P78396 RPL5P14-201ENST00000494197 878 ntBASIC7.49□□□□□ -1.21
CCNA1P78396 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.49□□□□□ -1.21
CCNA1P78396 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.49□□□□□ -1.21
CCNA1P78396 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 PCA3_2.1-201ENST00000612507 409 ntBASIC7.49□□□□□ -1.21
CCNA1P78396 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCNA1P78396 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.49□□□□□ -1.21
CCNA1P78396 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.49□□□□□ -1.21
CCNA1P78396 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.48□□□□□ -1.21
CCNA1P78396 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.48□□□□□ -1.21
CCNA1P78396 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 398.1 ms