Protein–RNA interactions for Protein: U3KQ87

Uncharacterized protein, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQ87 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
U3KQ87 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.69■□□□□ 0.26
U3KQ87 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.69■□□□□ 0.26
U3KQ87 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
U3KQ87 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.69■□□□□ 0.26
U3KQ87 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
U3KQ87 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
U3KQ87 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.69■□□□□ 0.26
U3KQ87 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.69■□□□□ 0.26
U3KQ87 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U3KQ87 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.69■□□□□ 0.26
U3KQ87 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
U3KQ87 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.68■□□□□ 0.26
U3KQ87 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
U3KQ87 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.68■□□□□ 0.26
U3KQ87 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U3KQ87 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
U3KQ87 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
U3KQ87 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
U3KQ87 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.67■□□□□ 0.26
U3KQ87 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.67■□□□□ 0.26
U3KQ87 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
U3KQ87 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.67■□□□□ 0.26
U3KQ87 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U3KQ87 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.67■□□□□ 0.26
U3KQ87 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
U3KQ87 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.66■□□□□ 0.26
U3KQ87 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.66■□□□□ 0.26
U3KQ87 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
U3KQ87 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 SMUG1P1-201ENST00000590640 811 ntBASIC16.66■□□□□ 0.26
U3KQ87 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
U3KQ87 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
U3KQ87 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.66■□□□□ 0.26
U3KQ87 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
U3KQ87 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
U3KQ87 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U3KQ87 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.65■□□□□ 0.26
U3KQ87 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.65■□□□□ 0.26
U3KQ87 TNRC18P3-201ENST00000441896 2691 ntBASIC16.65■□□□□ 0.26
U3KQ87 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
U3KQ87 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms