Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 H19-201ENST00000411754 1788 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 MIR6090-201ENST00000622481 60 ntBASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01558Q9Y6Z2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 CICP6-201ENST00000457191 2729 ntBASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC01558Q9Y6Z2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms