Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SPCS1Q9Y6A9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SPCS1Q9Y6A9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPCS1Q9Y6A9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPCS1Q9Y6A9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPCS1Q9Y6A9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SPCS1Q9Y6A9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SPCS1Q9Y6A9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SPCS1Q9Y6A9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 MST1L-201ENST00000442552 2185 ntBASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
SPCS1Q9Y6A9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms