Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB13Q9Y5F0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB13Q9Y5F0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
PCDHB13Q9Y5F0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDHB13Q9Y5F0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB13Q9Y5F0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB13Q9Y5F0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHB13Q9Y5F0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 RNA5SP413-201ENST00000516373 109 ntBASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 UNC93B5-201ENST00000530315 699 ntBASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 PHGDH-210ENST00000641115 1638 ntBASIC21.88■■□□□ 1.09
PCDHB13Q9Y5F0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 UNC93B4-201ENST00000505679 747 ntBASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 SOX15-203ENST00000570788 1093 ntBASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 AC120498.8-201ENST00000614275 531 ntBASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB13Q9Y5F0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 TMEM179-206ENST00000616017 1645 ntBASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms