Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EXOSC1Q9Y3B2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AF213884.3-201ENST00000563833 479 ntBASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AL356652.1-201ENST00000615962 565 ntBASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AC106739.1-201ENST00000617035 715 ntBASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EXOSC1Q9Y3B2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXOSC1Q9Y3B2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 AC104187.1-201ENST00000607510 612 ntBASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXOSC1Q9Y3B2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms