Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 AC138932.1-201ENST00000534164 6830 ntBASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH1Q9Y2L9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 AC110285.6-201ENST00000617652 491 ntBASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH1Q9Y2L9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 AC010141.3-201ENST00000456659 717 ntBASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 AC090164.3-201ENST00000610780 2143 ntBASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH1Q9Y2L9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 AL354751.1-201ENST00000412768 1863 ntBASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH1Q9Y2L9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 MIR638-201ENST00000385237 100 ntBASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 AC133561.4-201ENST00000566112 224 ntBASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH1Q9Y2L9 AC241377.3-202ENST00000626088 1088 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms