Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 AL118508.1-201ENST00000613502 2345 ntBASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM4Q9UKN5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.45■□□□□ 0.87
PRDM4Q9UKN5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 MIR6724-1-201ENST00000616420 92 ntBASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 MIR6724-2-201ENST00000616483 92 ntBASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 MIR6724-4-201ENST00000617390 92 ntBASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 MIR6724-3-201ENST00000622482 92 ntBASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM4Q9UKN5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM4Q9UKN5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 AC104564.3-201ENST00000582367 638 ntBASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PRDM4Q9UKN5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM4Q9UKN5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms