Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 AC116351.2-201ENST00000606540 1585 ntBASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMGXB4Q9UGU5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGXB4Q9UGU5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 RN7SL471P-201ENST00000580476 299 ntBASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 AL121906.2-201ENST00000621597 723 ntBASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGXB4Q9UGU5 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 AL121829.2-201ENST00000620908 328 ntBASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 TMEM191A-211ENST00000637163 1067 ntBASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 AL023875.1-201ENST00000640777 796 ntBASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
HMGXB4Q9UGU5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 TFP1-202ENST00000475455 1573 ntBASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HMGXB4Q9UGU5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms