Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 AC116562.4-201ENST00000641316 2276 ntBASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 BX323043.1-201ENST00000641006 1765 ntBASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPSF2Q9P2I0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 CDV3P1-201ENST00000471403 739 ntBASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 FAM21FP-204ENST00000608637 956 ntBASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPSF2Q9P2I0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 MYCNOS-205ENST00000641950 531 ntBASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPSF2Q9P2I0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 AC005082.1-201ENST00000413042 2259 ntBASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF2Q9P2I0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPSF2Q9P2I0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CPSF2Q9P2I0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CPSF2Q9P2I0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms