Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 AC006557.6-201ENST00000623071 864 ntBASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN4Q9NRR5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 AC009237.14-201ENST00000609975 1594 ntBASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UBQLN4Q9NRR5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN4Q9NRR5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN4Q9NRR5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN4Q9NRR5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms