Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.42■□□□□ 0.54
POLE3Q9NRF9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLE3Q9NRF9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 AP001271.2-201ENST00000624018 1556 ntBASIC18.41■□□□□ 0.54
POLE3Q9NRF9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.41■□□□□ 0.54
POLE3Q9NRF9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 GPX1P1-201ENST00000388829 606 ntBASIC18.4■□□□□ 0.54
POLE3Q9NRF9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 AC083906.2-201ENST00000511578 360 ntBASIC18.4■□□□□ 0.54
POLE3Q9NRF9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.4■□□□□ 0.54
POLE3Q9NRF9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.39■□□□□ 0.54
POLE3Q9NRF9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
POLE3Q9NRF9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 MIPEPP3-201ENST00000412105 444 ntBASIC18.39■□□□□ 0.53
POLE3Q9NRF9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 AC092118.2-201ENST00000613495 667 ntBASIC18.39■□□□□ 0.53
POLE3Q9NRF9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.39■□□□□ 0.53
POLE3Q9NRF9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 NCF1B-203ENST00000435988 1254 ntBASIC18.38■□□□□ 0.53
POLE3Q9NRF9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.38■□□□□ 0.53
POLE3Q9NRF9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms