Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
SP110Q9HB58 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SP110Q9HB58 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.33■□□□□ 0.85
SP110Q9HB58 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
SP110Q9HB58 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
SP110Q9HB58 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
SP110Q9HB58 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.33■□□□□ 0.85
SP110Q9HB58 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SP110Q9HB58 UNC93B4-201ENST00000505679 747 ntBASIC20.33■□□□□ 0.85
SP110Q9HB58 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.33■□□□□ 0.85
SP110Q9HB58 AC008687.6-201ENST00000596318 630 ntBASIC20.33■□□□□ 0.85
SP110Q9HB58 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SP110Q9HB58 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SP110Q9HB58 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.33■□□□□ 0.84
SP110Q9HB58 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP110Q9HB58 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SP110Q9HB58 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP110Q9HB58 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SP110Q9HB58 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SP110Q9HB58 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SP110Q9HB58 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP110Q9HB58 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SP110Q9HB58 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.33■□□□□ 0.84
SP110Q9HB58 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP110Q9HB58 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP110Q9HB58 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP110Q9HB58 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.32■□□□□ 0.84
SP110Q9HB58 TCF3P1-201ENST00000423021 1937 ntBASIC20.32■□□□□ 0.84
SP110Q9HB58 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
SP110Q9HB58 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SP110Q9HB58 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SP110Q9HB58 AP003097.1-201ENST00000530657 1135 ntBASIC20.32■□□□□ 0.84
SP110Q9HB58 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.32■□□□□ 0.84
SP110Q9HB58 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.32■□□□□ 0.84
SP110Q9HB58 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SP110Q9HB58 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.32■□□□□ 0.84
SP110Q9HB58 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SP110Q9HB58 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.31■□□□□ 0.84
SP110Q9HB58 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SP110Q9HB58 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SP110Q9HB58 AL691432.2-201ENST00000607222 2038 ntBASIC20.31■□□□□ 0.84
SP110Q9HB58 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SP110Q9HB58 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.31■□□□□ 0.84
SP110Q9HB58 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.31■□□□□ 0.84
SP110Q9HB58 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SP110Q9HB58 AC073130.3-201ENST00000624389 2278 ntBASIC20.3■□□□□ 0.84
SP110Q9HB58 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SP110Q9HB58 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SP110Q9HB58 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 PCDHAC2-203ENST00000615316 3011 ntBASIC20.3■□□□□ 0.84
SP110Q9HB58 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SP110Q9HB58 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.3■□□□□ 0.84
SP110Q9HB58 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.3■□□□□ 0.84
SP110Q9HB58 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.3■□□□□ 0.84
SP110Q9HB58 RPS2P52-201ENST00000469610 820 ntBASIC20.3■□□□□ 0.84
SP110Q9HB58 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SP110Q9HB58 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.3■□□□□ 0.84
SP110Q9HB58 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.3■□□□□ 0.84
SP110Q9HB58 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.3■□□□□ 0.84
SP110Q9HB58 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.3■□□□□ 0.84
SP110Q9HB58 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.3■□□□□ 0.84
SP110Q9HB58 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SP110Q9HB58 AC124283.5-201ENST00000624661 1809 ntBASIC20.3■□□□□ 0.84
SP110Q9HB58 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SP110Q9HB58 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.29■□□□□ 0.84
SP110Q9HB58 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SP110Q9HB58 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms