Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 IRS3P-201ENST00000223076 1006 ntBASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 AP001160.3-201ENST00000601484 763 ntBASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 AC243732.1-201ENST00000612648 864 ntBASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 AC131212.1-201ENST00000613771 668 ntBASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 Z82202.1-201ENST00000623446 1880 ntBASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF556Q9HAH1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 AC091799.1-201ENST00000422823 811 ntBASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 KRT18P20-201ENST00000548986 1279 ntBASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 MIR6084-201ENST00000622012 110 ntBASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF556Q9HAH1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.33■□□□□ 0.53
ZNF556Q9HAH1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 CDV3P1-201ENST00000471403 739 ntBASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 AC104187.1-201ENST00000607510 612 ntBASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF556Q9HAH1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms