Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 AL358472.4-201ENST00000633140 710 ntBASIC23.13■■□□□ 1.29
EFCC1Q9HA90 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 AC023632.3-201ENST00000521633 145 ntBASIC23.12■■□□□ 1.29
EFCC1Q9HA90 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 CR392000.1-201ENST00000624770 1228 ntBASIC23.12■■□□□ 1.29
EFCC1Q9HA90 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.12■■□□□ 1.29
EFCC1Q9HA90 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 KRT126P-201ENST00000549467 1181 ntBASIC23.11■■□□□ 1.29
EFCC1Q9HA90 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 AC027702.1-201ENST00000563810 1770 ntBASIC23.11■■□□□ 1.29
EFCC1Q9HA90 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
EFCC1Q9HA90 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.11■■□□□ 1.29
EFCC1Q9HA90 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 KRT8P36-201ENST00000489121 1440 ntBASIC23.1■■□□□ 1.29
EFCC1Q9HA90 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.1■■□□□ 1.29
EFCC1Q9HA90 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
EFCC1Q9HA90 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 KRT18P56-201ENST00000507275 550 ntBASIC23.09■■□□□ 1.29
EFCC1Q9HA90 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.09■■□□□ 1.29
EFCC1Q9HA90 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.08■■□□□ 1.29
EFCC1Q9HA90 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EFCC1Q9HA90 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
EFCC1Q9HA90 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms