Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 AC124016.1-201ENST00000609552 612 ntBASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VRTNQ9H8Y1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VRTNQ9H8Y1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 GCSHP5-201ENST00000443090 522 ntBASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 AL023875.1-201ENST00000640777 796 ntBASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
VRTNQ9H8Y1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
VRTNQ9H8Y1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
VRTNQ9H8Y1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VRTNQ9H8Y1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
VRTNQ9H8Y1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VRTNQ9H8Y1 AC112907.3-201ENST00000577781 2400 ntBASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 AC239809.2-201ENST00000415381 517 ntBASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 RPPH1-201ENST00000516869 333 ntBASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 AL359736.2-201ENST00000621992 437 ntBASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VRTNQ9H8Y1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 AP006587.1-201ENST00000534129 1502 ntBASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.13■□□□□ 0.97
VRTNQ9H8Y1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms